RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TEX9Q8N6V9 391 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 MICAL1Q8TDZ2 1067 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 ALG3Q92685 438 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 IFT74Q96LB3 600 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 NT5C3AQ9H0P0 336 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 TLDC2A0PJX2 215 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 FERP16591 822 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 COPB2P35606 906 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 ART4Q93070 314 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 UTP4Q969X6 686 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 FGFR1OP2Q9NVK5 253 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 PARP2Q9UGN5 583 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 IRS2Q9Y4H2 1338 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 RASGRF2O14827 1237 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 CDC25CP30307 473 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 CHRNA3P32297 505 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 PDE6BP35913 854 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 IFNAR2P48551 515 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 TCEAL1Q15170 157 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 CGB2Q6NT52 195 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 C3orf67Q6ZVT6 689 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 RASAL2Q9UJF2 1139 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
SMARCAL1-201ENST00000357276 PODXLO00592 558 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 ABLIM1O14639 778 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 MGAT5Q09328 741 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 ZDHHC14Q8IZN3 488 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 PRELID2Q8N945 189 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 U2AF1L4Q8WU68 220 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 CKAP2Q8WWK9 683 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLC35C1Q96A29 364 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 ARHGEF10LQ9HCE6 1279 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 ZFATQ9P243 1243 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 STX8Q9UNK0 236 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 TCP11X1B4DZS4 312 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 E7ENQ6 273 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 E9PMD0 336 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 AHCYL1O43865 530 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 PLA2G4BP0C869 781 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 HSPA6P17066 643 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 CASP5P51878 434 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 CYP1B1Q16678 543 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLC44A5Q8NCS7 719 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 C18orf8Q96DM3 657 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 BORCS6Q96GS4 357 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 NAF1Q96HR8 494 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 MXD3Q9BW11 206 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 GGT7Q9UJ14 662 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 TP73O15350 636 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 AKAP3O75969 853 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 LMNB1P20700 586 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 ITPK1Q13572 414 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 BMT2Q1RMZ1 405 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 PARP6Q2NL67 630 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 HERC4Q5GLZ8 1057 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 TTC27Q6P3X3 843 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 SPATA21Q7Z572 469 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 CRAMP1Q96RY5 1269 aa13.07□□□□□ -0.32
SMARCAL1-201ENST00000357276 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 PDXKO00764 312 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 UNC5CO95185 931 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 GPR88Q9GZN0 384 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 DBR1Q9UK59 544 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 EVI5O60447 810 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 ADCY7P51828 1080 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 MKRN3Q13064 507 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 BIRC2Q13490 618 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 KNOP1Q1ED39 458 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 RUNDC3BQ96NL0 473 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms