RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 CNPY4Q8N129 248 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 KDM5AP29375 1690 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SRGAP2CP0DJJ0 459 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 BRAFP15056 766 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 FGFR4P22455 802 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 BTDP43251 543 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 PPP6R3Q5H9R7 873 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 ERICH1Q86X53 443 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 TBCKQ8TEA7 893 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SEL1LQ9UBV2 794 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 TTC8Q8TAM2 541 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 ABHD10Q9NUJ1 306 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 STMN3Q9NZ72 180 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 PRPF4O43172 522 aaKnown RBP eCLIP11.74□□□□□ -0.531e-9■■■■■ 31.7
GTF3C1-201ENST00000356183 TBC1D4O60343 1298 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SLC9A1P19634 815 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 PDCD6IPQ8WUM4 868 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SH3GL1Q99961 368 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SFI1A8K8P3 1242 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 XPO1O14980 1071 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SPICE1Q8N0Z3 855 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 NUP93Q8N1F7 819 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 EAF2Q96CJ1 260 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 TMA16Q96EY4 203 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 ATP6V1G3Q96LB4 118 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 NDST4Q9H3R1 872 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 TMEM206Q9H813 350 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 ELF1P32519 619 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 COPB2P35606 906 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SLC16A2P36021 539 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 EAPPQ56P03 285 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SLC17A8Q8NDX2 589 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 H0YIN7 160 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 SERPINB3P29508 390 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 GRIN1Q05586 938 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 MFSD14BQ5SR56 506 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 TTC30AQ86WT1 665 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 CCDC103Q8IW40 242 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF473Q8WTR7 871 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 NPHS2Q9NP85 383 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 DISP1Q96F81 1524 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 NCAPHQ15003 741 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 KRT39Q6A163 491 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 CATSPER1Q8NEC5 780 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 RUBCNLQ9H714 662 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 DIABLOQ9NR28 239 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 OLFML3Q9NRN5 406 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 AKAP10O43572 662 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 GPS1Q13098 491 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 RNF139Q8WU17 664 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 OSBPL9Q96SU4 736 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 ADAMTS1Q9UHI8 967 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 CCNL1Q9UK58 526 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 TMCC1O94876 653 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 PLA2G4BP0C869 781 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 GRK2P25098 689 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 FKBP3Q00688 224 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 MAP3K10Q02779 954 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 NR5A1Q13285 461 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 UBE2SQ16763 222 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 ARL13BQ3SXY8 428 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 SLFN13Q68D06 897 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 ZBED8Q8IZ13 594 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 GANCQ8TET4 914 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 AK8Q96MA6 479 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 MYO1GB0I1T2 1018 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 DLGAP3O95886 979 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 MMP1P03956 469 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 ANXA13P27216 316 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 PTK2BQ14289 1009 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 ULK4Q96C45 1275 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-201ENST00000356183 E5RI56 91 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 PPARGP37231 505 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ICA1Q05084 483 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 EXOC8Q8IYI6 725 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 INPP5DQ92835 1189 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 FAM96AQ9H5X1 160 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
GTF3C1-201ENST00000356183 ABCC10Q5T3U5 1492 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms