RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
TRIM13-201ENST00000356017 TRIM9Q9C026 710 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 PARVGQ9HBI0 331 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 HOOK1Q9UJC3 728 aaKnown RBP17.2■□□□□ 0.34
TRIM13-201ENST00000356017 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 A0A087WZ62 844 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 NPHP3-ACAD11A0A0J9YXS1 232 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 NR1I2O75469 434 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 FAM13AO94988 1023 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 PLS3P13797 630 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 EIF4BP23588 611 aaKnown RBP17.19■□□□□ 0.34
TRIM13-201ENST00000356017 AFMP43652 599 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 PHKA2P46019 1235 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 SMTNP53814 917 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 MAPK7Q13164 816 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 RPUSD2Q8IZ73 545 aaKnown RBP17.19■□□□□ 0.34
TRIM13-201ENST00000356017 ASAP3Q8TDY4 903 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 STAMQ92783 540 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 SCLYQ96I15 445 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 OSMRQ99650 979 aa17.19■□□□□ 0.34
TRIM13-201ENST00000356017 FDXACB1Q9BRP7 624 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-201ENST00000356017 LRRIQ4A6NIV6 560 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PFKMP08237 780 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 LIG1P18858 919 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 ZNF131P52739 623 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 FPGSQ05932 587 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PPIGQ13427 754 aaKnown RBP eCLIP17.18■□□□□ 0.346e-7■□□□□ 9.7
TRIM13-201ENST00000356017 CAPSQ13938 189 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PCBP1Q15365 356 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM13-201ENST00000356017 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 SRGAP1Q7Z6B7 1085 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 CCDC65Q8IXS2 484 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 DEPTORQ8TB45 409 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 BADQ92934 168 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 DNAJC19Q96DA6 116 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PPP1R16BQ96T49 567 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 NTPCRQ9BSD7 190 aaKnown RBP17.18■□□□□ 0.34
TRIM13-201ENST00000356017 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 CDHR5Q9HBB8 845 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 IFT122Q9HBG6 1241 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 SEL1LQ9UBV2 794 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 IDEP14735 1019 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 DARSP14868 501 aaKnown RBP17.18■□□□□ 0.34
TRIM13-201ENST00000356017 CSF2RAP15509 400 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 GAP43P17677 238 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 SCP2P22307 547 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PEX3P56589 373 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PTENP60484 403 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 ASIC1P78348 528 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-201ENST00000356017 TSHZ1Q6ZSZ6 1077 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-201ENST00000356017 ZBTB8OSQ8IWT0 167 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 ELOA2Q8IYF1 753 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-201ENST00000356017 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 SPIRE2Q8WWL2 714 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
TRIM13-201ENST00000356017 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 CCDC169A6NNP5 214 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 H0YCG3 227 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 GPR182O15218 404 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 NBNO60934 754 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 RPS6KA5O75582 802 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 CXCL10P02778 98 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM13-201ENST00000356017 MCM4P33991 863 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 NPTX2P47972 431 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 EFNA5P52803 228 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 MBTPS1Q14703 1052 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 BSNDQ8WZ55 320 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 ZNF668Q96K58 619 aaPredicted RBP17.17■□□□□ 0.34
TRIM13-201ENST00000356017 KMT5AQ9NQR1 393 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 PANK4Q9NVE7 773 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 EVPLQ92817 2033 aa17.17■□□□□ 0.34
TRIM13-201ENST00000356017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-201ENST00000356017 PVALEFA0A1B0GWK0 134 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 FRMD3A2A2Y4 597 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-201ENST00000356017 TRAK2O60296 914 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 GHRP10912 638 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 ABCD1P33897 745 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 LPIN1Q14693 890 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 CDCA2Q69YH5 1023 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-201ENST00000356017 TMEM40Q8WWA1 233 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 APBB2Q92870 758 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 IFIH1Q9BYX4 1025 aaKnown RBP17.16■□□□□ 0.34
TRIM13-201ENST00000356017 IL23AQ9NPF7 189 aa17.16■□□□□ 0.34
TRIM13-201ENST00000356017 INO80B-WBP1J3KQ70 363 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 PTMSP20962 102 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 PAK2Q13177 524 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 CUL4BQ13620 913 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 GPNMBQ14956 572 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 POSTNQ15063 836 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms