RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 FGRP09769 529 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 ADH5P11766 374 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 FOSL1P15407 271 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 CYP7A1P22680 504 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 SHMT1P34896 483 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 SERPINB4P48594 390 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 RABGGTBP53611 331 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 DYNLL1P63167 89 aaKnown RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 SEPT2Q15019 361 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 ZNF792Q3KQV3 632 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 MB21D2Q8IYB1 491 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 STAG1Q8WVM7 1258 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 EZH1Q92800 747 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 ZNF274Q96GC6 653 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 TMEM87BQ96K49 555 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 MMP19Q99542 508 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 ANP32EQ9BTT0 268 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 CRNKL1Q9BZJ0 848 aaKnown RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 SLKQ9H2G2 1235 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 ARPP21Q9UBL0 812 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-201ENST00000355766 BRPF3Q9ULD4 1205 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 NID2Q14112 1375 aa8.04□□□□□ -1.12
VPS13A-201ENST00000355766 TRANK1O15050 2925 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 MYO5AQ9Y4I1 1855 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 GSG1L2A8MUP6 293 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 H3BRB1 525 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 FLOT1O75955 427 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 CD4P01730 458 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 ASGR1P07306 291 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 MYOGP15173 224 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 CYP2C18P33260 490 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 TXKP42681 527 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 HMGN5P82970 282 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 NHLH1Q02575 133 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 KCTD2Q14681 263 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 TMEM132BQ14DG7 1078 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 SART3Q15020 963 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 POU4F3Q15319 338 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 SBK1Q52WX2 424 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 KIAA0319Q5VV43 1072 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 OTOP2Q7RTS6 562 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 SGMS1Q86VZ5 419 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 MSL3Q8N5Y2 521 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 PCSK9Q8NBP7 692 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 GTF3C6Q969F1 213 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 HIPK3Q9H422 1215 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 TUT1Q9H6E5 874 aaKnown RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 ADGRE2Q9UHX3 823 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 ZHX1Q9UKY1 873 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-201ENST00000355766 FAM184BQ9ULE4 1060 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 ATP6V1DQ9Y5K8 247 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 ACTL7BQ9Y614 415 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 UMODL1Q5DID0 1318 aa8.03□□□□□ -1.12
VPS13A-201ENST00000355766 EPOPA6NHQ4 379 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 GOLGA6L22H0YM25 854 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 RFXAPO00287 272 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 ORC4O43929 436 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 PFKFB2O60825 505 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 DUSP11O75319 330 aaKnown RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 CHGBP05060 677 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 CYP11A1P05108 521 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 CA3P07451 260 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 C6orf222P0C671 652 aaPredicted RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 ATP2A2P16615 1042 aaKnown RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 COPB2P35606 906 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 LIFRP42702 1097 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 TDO2P48775 406 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 ARHGAP4P98171 946 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 TOB2Q14106 344 aaPredicted RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 CPSF6Q16630 551 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 KIAA1755Q5JYT7 1200 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 STOX1Q6ZVD7 989 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 ZAR1Q86SH2 424 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 RIOX2Q8IUF8 465 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 AMOTL1Q8IY63 956 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 TMTC2Q8N394 836 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 LCORLQ8N3X6 602 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 TRIM56Q9BRZ2 755 aaKnown RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 UPF3AQ9H1J1 476 aaKnown RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 ZNF287Q9HBT7 754 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 EPB41L4AQ9HCS5 686 aaPredicted RBP8.02□□□□□ -1.13
VPS13A-201ENST00000355766 CD320Q9NPF0 282 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 SLC4A7Q9Y6M7 1214 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 SLC4A4Q9Y6R1 1079 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 GBF1Q92538 1859 aa8.02□□□□□ -1.13
VPS13A-201ENST00000355766 TCF20Q9UGU0 1960 aaKnown RBP8.01□□□□□ -1.13
VPS13A-201ENST00000355766 WDR46O15213 610 aaKnown RBP8.01□□□□□ -1.13
VPS13A-201ENST00000355766 ADCY6O43306 1168 aa8.01□□□□□ -1.13
VPS13A-201ENST00000355766 ECEL1O95672 775 aa8.01□□□□□ -1.13
VPS13A-201ENST00000355766 BRD1O95696 1058 aa8.01□□□□□ -1.13
VPS13A-201ENST00000355766 SNAI1O95863 264 aaPredicted RBP8.01□□□□□ -1.13
VPS13A-201ENST00000355766 B3GALT4O96024 378 aa8.01□□□□□ -1.13
VPS13A-201ENST00000355766 APPP05067 770 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms