RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 CTDP1Q9Y5B0 961 aaPredicted RBP23.69■■□□□ 1.38
LIMS2-202ENST00000355119 NCANO14594 1321 aa23.68■■□□□ 1.38
LIMS2-202ENST00000355119 CTNND1O60716 968 aaKnown RBP23.68■■□□□ 1.38
LIMS2-202ENST00000355119 HNRNPH2P55795 449 aaKnown RBP23.68■■□□□ 1.38
LIMS2-202ENST00000355119 SNRPFP62306 86 aaKnown RBP23.68■■□□□ 1.38
LIMS2-202ENST00000355119 PLS1Q14651 629 aa23.68■■□□□ 1.38
LIMS2-202ENST00000355119 MUM1L1Q5H9M0 696 aa23.68■■□□□ 1.38
LIMS2-202ENST00000355119 FBXO41Q8TF61 875 aa23.68■■□□□ 1.38
LIMS2-202ENST00000355119 TEPSINQ96N21 525 aa23.68■■□□□ 1.38
LIMS2-202ENST00000355119 TMEM253P0C7T8 217 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 CAPN2P17655 700 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 ACTN2P35609 894 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 GALCP54803 685 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 LEKR1Q6ZMV7 388 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 PEX26Q7Z412 305 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 OLIG1Q8TAK6 271 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 CCDC43Q96MW1 224 aaKnown RBP23.67■■□□□ 1.38
LIMS2-202ENST00000355119 SYT11Q9BT88 431 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 GPR88Q9GZN0 384 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 ST6GALNAC4Q9H4F1 302 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 PPP1R9AQ9ULJ8 1098 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 STXBP5LQ9Y2K9 1186 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 P4HA2O15460 535 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 ZBED4O75132 1171 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 GLI1P08151 1106 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 ZNF280AP59817 542 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-202ENST00000355119 CETN1Q12798 172 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 MAEAQ7L5Y9 396 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 SLC16A10Q8TF71 515 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 TAAR1Q96RJ0 339 aa23.67■■□□□ 1.38
LIMS2-202ENST00000355119 MAPK13O15264 365 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 OPA1O60313 960 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 FDX1P10109 184 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 JAK3P52333 1124 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 GUCY2DQ02846 1103 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 KIF22Q14807 665 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 PGM5Q15124 567 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 C4orf19Q8IY42 314 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 SLC17A8Q8NDX2 589 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 JDP2Q8WYK2 163 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 CALR3Q96L12 384 aaKnown RBP23.66■■□□□ 1.38
LIMS2-202ENST00000355119 IWS1Q96ST2 819 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 EPB41L5Q9HCM4 733 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 HOMER2Q9NSB8 354 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 CEP104O60308 925 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 EIF2AK2P19525 551 aaKnown RBP23.66■■□□□ 1.38
LIMS2-202ENST00000355119 YWHABP31946 246 aaKnown RBP23.66■■□□□ 1.38
LIMS2-202ENST00000355119 VAMP7P51809 220 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 ZSCAN26Q16670 478 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 DNAAF5Q86Y56 855 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 GLYCTKQ8IVS8 523 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 SCFD2Q8WU76 684 aa23.66■■□□□ 1.38
LIMS2-202ENST00000355119 GOLGA8KD6RF30 607 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 PGRMC1O00264 195 aaKnown RBP23.65■■□□□ 1.38
LIMS2-202ENST00000355119 HSF2BPO75031 334 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 RPS6KA5O75582 802 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 TNFAIP3P21580 790 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 RPS6P62753 249 aaKnown RBP23.65■■□□□ 1.38
LIMS2-202ENST00000355119 RDH13Q8NBN7 331 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 LMO3Q8TAP4 145 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 RIN2Q8WYP3 895 aaPredicted RBP23.65■■□□□ 1.38
LIMS2-202ENST00000355119 SH3GL2Q99962 352 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 PIM2Q9P1W9 311 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 TCEAL9Q9UHQ7 104 aa23.65■■□□□ 1.38
LIMS2-202ENST00000355119 TMCO5BA8MYB1 307 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 ZBTB48P10074 688 aaPredicted RBP23.64■■□□□ 1.38
LIMS2-202ENST00000355119 SFNP31947 248 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 RNASE9P60153 205 aaKnown RBP23.64■■□□□ 1.38
LIMS2-202ENST00000355119 PSMC5P62195 406 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 GTF2BQ00403 316 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.64■■□□□ 1.388e-7■■■■■ 58.5
LIMS2-202ENST00000355119 RFFLQ8WZ73 363 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.64■■□□□ 1.38
LIMS2-202ENST00000355119 PCIF1Q9H4Z3 704 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 ANKEF1Q9NU02 776 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 EMSYQ7Z589 1322 aa23.64■■□□□ 1.38
LIMS2-202ENST00000355119 RPS12P25398 132 aaKnown RBP23.64■■□□□ 1.37
LIMS2-202ENST00000355119 CARSP49589 748 aaKnown RBP23.64■■□□□ 1.37
LIMS2-202ENST00000355119 KRT76Q01546 638 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 PHLDB3Q6NSJ2 640 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 HAUS6Q7Z4H7 955 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 DAAM2Q86T65 1068 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 NT5DC3Q86UY8 548 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 METTL13Q8N6R0 699 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 EIF1ADQ8N9N8 165 aaKnown RBP23.64■■□□□ 1.37
LIMS2-202ENST00000355119 XXYLT1Q8NBI6 393 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 CTNNBL1Q8WYA6 563 aaPredicted RBP23.64■■□□□ 1.37
LIMS2-202ENST00000355119 GOLPH3Q9H4A6 298 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 CWC15Q9P013 229 aaKnown RBP23.64■■□□□ 1.37
LIMS2-202ENST00000355119 AMFRQ9UKV5 643 aa23.64■■□□□ 1.37
LIMS2-202ENST00000355119 ASTN2O75129 1339 aaPredicted RBP23.64■■□□□ 1.37
LIMS2-202ENST00000355119 WDR64B1ANS9 1081 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 MYCLP12524 364 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-202ENST00000355119 VCAM1P19320 739 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 SPP2Q13103 211 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 ARHGAP44Q17R89 818 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 XRRA1Q6P2D8 792 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 RNF207Q6ZRF8 634 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 RASGEF1CQ8N431 466 aa23.63■■□□□ 1.37
LIMS2-202ENST00000355119 TSEN2Q8NCE0 465 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms