RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RPS6P62753 249 aaKnown RBP16.01■□□□□ 0.15
COL17A1-201ENST00000353479 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 GTF3C2Q8WUA4 911 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-201ENST00000353479 GBP1P32455 592 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 CCDC68Q9H2F9 335 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 KIF1AQ12756 1690 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 CIITAP33076 1130 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 EPHX2P34913 555 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 DRAP1Q14919 205 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-201ENST00000353479 PLA2G4FQ68DD2 849 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 A6NNZ2 444 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 GFPT1Q06210 699 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-201ENST00000353479 TUBB8Q3ZCM7 444 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 USP49Q70CQ1 688 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 KIF12Q96FN5 646 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 ANAPC7Q9UJX3 599 aa16.01■□□□□ 0.15
COL17A1-201ENST00000353479 GMNNO75496 209 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 MNAT1P51948 309 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 PLTPP55058 493 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 BASP1P80723 227 aaKnown RBP16■□□□□ 0.15
COL17A1-201ENST00000353479 TRIP13Q15645 432 aaPredicted RBP16■□□□□ 0.15
COL17A1-201ENST00000353479 RABGGTAQ92696 567 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 FAM114A2Q9NRY5 505 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 PIN4Q9Y237 131 aaKnown RBP16■□□□□ 0.15
COL17A1-201ENST00000353479 TSPY1Q01534 308 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 POC1B-GALNT4F8VUJ3 575 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 SRGAP2BP0DMP2 458 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 TBXAS1P24557 533 aaPredicted RBP16■□□□□ 0.15
COL17A1-201ENST00000353479 ARL13BQ3SXY8 428 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 ARHGEF18Q6ZSZ5 1173 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 GCNAQ96QF7 691 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 C11orf70Q9BRQ4 267 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 AP1M1Q9BXS5 423 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 XPAP23025 273 aaPredicted RBP16■□□□□ 0.15
COL17A1-201ENST00000353479 ZNF131P52739 623 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 NBPF12Q5TAG4 269 aaPredicted RBP16■□□□□ 0.15
COL17A1-201ENST00000353479 SCYL1Q96KG9 808 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 KCNH7Q9NS40 1196 aa16■□□□□ 0.15
COL17A1-201ENST00000353479 PRKCEQ02156 737 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 CDKL2Q92772 493 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 GINM1Q9NU53 330 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 PDXKO00764 312 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 SLC4A1P02730 911 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 DNAAF3Q8N9W5 541 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 SLITRK6Q9H5Y7 841 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 M0QYV0 167 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 PFDN6O15212 129 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 ICAM1P05362 532 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 CTSHP09668 335 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 RWDD2BP57060 319 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 VSIG1Q86XK7 387 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 KSR1Q8IVT5 923 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 MOV10L1Q9BXT6 1211 aaKnown RBP15.99■□□□□ 0.15
COL17A1-201ENST00000353479 IPO11Q9UI26 975 aaKnown RBP15.99■□□□□ 0.15
COL17A1-201ENST00000353479 UBE4BO95155 1302 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 MYMKA6NI61 221 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
COL17A1-201ENST00000353479 PPP6R3Q5H9R7 873 aaPredicted RBP15.99■□□□□ 0.15
COL17A1-201ENST00000353479 ZNF746Q6NUN9 644 aaPredicted RBP15.99■□□□□ 0.15
COL17A1-201ENST00000353479 TIPINQ9BVW5 301 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 ANAPC5Q9UJX4 755 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 PLSCR1O15162 318 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 GNA15P30679 374 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 C7orf25Q9BPX7 421 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 HOMER3Q9NSC5 361 aa15.99■□□□□ 0.15
COL17A1-201ENST00000353479 DPYDQ12882 1025 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 SEMA3FQ13275 785 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 EMC2Q15006 297 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 DUOXA2Q1HG44 320 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 RWDD4Q6NW29 188 aaKnown RBP15.98■□□□□ 0.15
COL17A1-201ENST00000353479 UBR1Q8IWV7 1749 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 PALMO75781 387 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 INPP5BP32019 993 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 ATP1A2P50993 1020 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 TMEM62Q0P6H9 643 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 SMAP1Q8IYB5 467 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-201ENST00000353479 ACAP3Q96P50 834 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 GTF2A2P52657 109 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 BACE1P56817 501 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 CLEC17AQ6ZS10 378 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 FBXL13Q8NEE6 735 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 RNF14Q9UBS8 474 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-201ENST00000353479 ESYT2A0FGR8 921 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 CIB2O75838 187 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 HSPA6P17066 643 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 GPC5P78333 572 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 MXD4Q14582 209 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-201ENST00000353479 CYP4F22Q6NT55 531 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 PTF1AQ7RTS3 328 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 FRMD5Q7Z6J6 570 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 CABS1Q96KC9 395 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 RILPQ96NA2 401 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 RIT2Q99578 217 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 HSPBP1Q9NZL4 362 aa15.98■□□□□ 0.15
COL17A1-201ENST00000353479 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
COL17A1-201ENST00000353479 TTC26A0AVF1 554 aa15.97■□□□□ 0.15
COL17A1-201ENST00000353479 EHD4Q9H223 541 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms