RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FMO2Q99518 471 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 AGPAT3Q9NRZ7 376 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 SEL1LQ9UBV2 794 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 APEX2Q9UBZ4 518 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 MYH11P35749 1972 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 C5orf60A6NFR6 353 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 DCDC2CA8MYV0 355 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 DRP2Q13474 957 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 PPP2R5AQ15172 486 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 KRT71Q3SY84 523 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 DUPD1Q68J44 220 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 TLCD1Q96CP7 247 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 LRRC4CQ9HCJ2 640 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 ZDHHC18Q9NUE0 388 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 SLX4Q8IY92 1834 aa26.58■■□□□ 1.85
CPNE1-202ENST00000352393 PSMD10O75832 226 aa26.58■■□□□ 1.85
CPNE1-202ENST00000352393 GDF11O95390 407 aa26.58■■□□□ 1.85
CPNE1-202ENST00000352393 MAGOHP61326 146 aaKnown RBP26.58■■□□□ 1.85
CPNE1-202ENST00000352393 KIF22Q14807 665 aa26.58■■□□□ 1.85
CPNE1-202ENST00000352393 RNF187Q5TA31 235 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-202ENST00000352393 KSR1Q8IVT5 923 aa26.58■■□□□ 1.85
CPNE1-202ENST00000352393 MAGOHBQ96A72 148 aaKnown RBP26.58■■□□□ 1.85
CPNE1-202ENST00000352393 NAP1L3Q99457 506 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-202ENST00000352393 DDX20Q9UHI6 824 aaKnown RBP26.58■■□□□ 1.85
CPNE1-202ENST00000352393 LOXHD1Q8IVV2 1947 aa26.58■■□□□ 1.85
CPNE1-202ENST00000352393 H0YHG0 523 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 CCDC172P0C7W6 258 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 TRIM49P0CI25 452 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 TRIM49CP0CI26 452 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 BMP3P12645 472 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 EIF3BP55884 814 aaKnown RBP26.57■■□□□ 1.84
CPNE1-202ENST00000352393 MYL7Q01449 175 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 DR1Q01658 176 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 PPP2R5CQ13362 524 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 HS2ST1Q7LGA3 356 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 ZNF720Q7Z2F6 126 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 TPH2Q8IWU9 490 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 CABS1Q96KC9 395 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 THAP2Q9H0W7 228 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 ERVK-5Q9HDB9 667 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 TAS2R14Q9NYV8 317 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 QPCTQ16769 361 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 ABCB5Q2M3G0 1257 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 ODF2Q5BJF6 829 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 SLC30A10Q6XR72 485 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 PALB2Q86YC2 1186 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 RAPGEF5Q92565 580 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 PSMD1Q99460 953 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 COG5Q9UP83 839 aa26.57■■□□□ 1.84
CPNE1-202ENST00000352393 COL11A2P13942 1736 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-202ENST00000352393 GOLGA6L10A0A0M3HER8 536 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 ANKRD62A6NC57 917 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 FAM187AA6NFU0 413 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 CYP2J2P51589 502 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 HADHBP55084 474 aaKnown RBP26.56■■□□□ 1.84
CPNE1-202ENST00000352393 LRCH2Q5VUJ6 765 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 SLC5A5Q92911 643 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 ERP44Q9BS26 406 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 TRIM31Q9BZY9 425 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 EPB41L4BQ9H329 900 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 FRMD4BQ9Y2L6 1034 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 ZBTB39O15060 712 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 ALG3Q92685 438 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 MRIQ9BWK5 157 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 ATP8A1Q9Y2Q0 1164 aa26.56■■□□□ 1.84
CPNE1-202ENST00000352393 NPM3O75607 178 aaKnown RBP26.55■■□□□ 1.84
CPNE1-202ENST00000352393 VCAM1P19320 739 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 TNFAIP3P21580 790 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 RFX1P22670 979 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 PRPF4BQ13523 1007 aaKnown RBP26.55■■□□□ 1.84
CPNE1-202ENST00000352393 DHX34Q14147 1143 aaKnown RBP26.55■■□□□ 1.84
CPNE1-202ENST00000352393 CLUL1Q15846 466 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 STXBP4Q6ZWJ1 553 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 FAM178BQ8IXR5 827 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 CCDC13Q8IYE1 715 aa26.55■■□□□ 1.84
CPNE1-202ENST00000352393 CHMP2AO43633 222 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 ONECUT3O60422 494 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-202ENST00000352393 NUDT17P0C025 328 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 CNOT10Q9H9A5 744 aaKnown RBP26.54■■□□□ 1.84
CPNE1-202ENST00000352393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.54■■□□□ 1.842e-10■□□□□ 11.3
CPNE1-202ENST00000352393 ODF2LQ9ULJ1 636 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 PRR12Q9ULL5 1215 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 MUTP22033 750 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 COPB2P35606 906 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 PRELPP51888 382 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 JAG1P78504 1218 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 PPARDQ03181 441 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 ZNF211Q13398 564 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-202ENST00000352393 BYSLQ13895 437 aaKnown RBP26.54■■□□□ 1.84
CPNE1-202ENST00000352393 PHLDB3Q6NSJ2 640 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 ARMC9Q7Z3E5 817 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 LMO3Q8TAP4 145 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 TATDN2Q93075 761 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 SCN9AQ15858 1988 aa26.54■■□□□ 1.84
CPNE1-202ENST00000352393 IFFO1Q0D2I5 559 aa26.53■■□□□ 1.84
CPNE1-202ENST00000352393 BFSP1Q12934 665 aa26.53■■□□□ 1.84
CPNE1-202ENST00000352393 C11orf63Q6NUN7 778 aa26.53■■□□□ 1.84
CPNE1-202ENST00000352393 JAMLQ86YT9 394 aa26.53■■□□□ 1.84
CPNE1-202ENST00000352393 KIAA0825Q8IV33 1275 aa26.53■■□□□ 1.84
CPNE1-202ENST00000352393 SLC9A9Q8IVB4 645 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms