RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TAC1P20366 129 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 FOXN2P32314 431 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 PTENP60484 403 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 ZNF790Q6PG37 636 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 CCDC25Q86WR0 208 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 JAMLQ86YT9 394 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 WDR60Q8WVS4 1066 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 LZICQ8WZA0 190 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 SYN2Q92777 582 aaPredicted RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 ZNF184Q99676 751 aaPredicted RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 KANSL2Q9H9L4 492 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 KRT82Q9NSB4 513 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 PAIP2BQ9ULR5 123 aaKnown RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 NRXN3Q9Y4C0 1643 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 PASKQ96RG2 1323 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 MAPK13O15264 365 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 CIAO1O76071 339 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 BRAFP15056 766 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 VEGFAP15692 232 aaPredicted RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 PDE6AP16499 860 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 RASSF2P50749 326 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 YARSP54577 528 aaKnown RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 MKRN3Q13064 507 aaKnown RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 MFSD5Q6N075 450 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 NAT14Q8WUY8 206 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 NMD3Q96D46 503 aaKnown RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 MPP4Q96JB8 637 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 MIS12Q9H081 205 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 TMEM60Q9H2L4 133 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 CIDEBQ9UHD4 219 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 PRKAB2O43741 272 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 VAV1P15498 845 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 PLCG1P19174 1290 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 SERPINB3P29508 390 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 GJA8P48165 433 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 TRAPPC10P48553 1259 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 AP1B1Q10567 949 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 MAP7Q14244 749 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 TNIP1Q15025 636 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 UBE3CQ15386 1083 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 ASIC2Q16515 512 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 MAGEB18Q96M61 343 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 NR1H4Q96RI1 486 aaPredicted RBP14.24□□□□□ -0.13
IFT88-202ENST00000351808 MIPEPQ99797 713 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 STXBP5LQ9Y2K9 1186 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 PFASO15067 1338 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 RPL21P46778 160 aaKnown RBP14.23□□□□□ -0.13
IFT88-202ENST00000351808 CDK7P50613 346 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 PTK2Q05397 1052 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 ALX1Q15699 326 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 GSTA3Q16772 222 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 GRAMD1AQ96CP6 724 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.23□□□□□ -0.13
IFT88-202ENST00000351808 SUCLA2Q9P2R7 463 aaPredicted RBP14.23□□□□□ -0.13
IFT88-202ENST00000351808 LAMB4A4D0S4 1761 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 BTNL10A8MVZ5 291 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 CYP11B2P19099 503 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 PTPN4P29074 926 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 HPCAP84074 193 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 LMNB2Q03252 620 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 TMED1Q13445 227 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
IFT88-202ENST00000351808 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
IFT88-202ENST00000351808 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 ARMCX3Q9UH62 379 aaPredicted RBP14.23□□□□□ -0.13
IFT88-202ENST00000351808 BARX2Q9UMQ3 279 aaPredicted RBP14.23□□□□□ -0.13
IFT88-202ENST00000351808 WDR37Q9Y2I8 494 aa14.23□□□□□ -0.13
IFT88-202ENST00000351808 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
IFT88-202ENST00000351808 PSMG1O95456 288 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 BTG3Q14201 252 aaPredicted RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 KSR1Q8IVT5 923 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 CYP4X1Q8N118 509 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 SMYD1Q8NB12 490 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 RASGRP4Q8TDF6 673 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 CADM1Q9BY67 442 aaKnown RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 PCDH18Q9HCL0 1135 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 SPATA7Q9P0W8 599 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 MTRF1LQ9UGC7 380 aaKnown RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 RPL26L1Q9UNX3 145 aaKnown RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 LRP6O75581 1613 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 TNKSO95271 1327 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 PIK3C2AO00443 1686 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 MAGEB3O15480 346 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 ACSL3O95573 720 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 KRT13P13646 458 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 CDR2Q01850 454 aa14.22□□□□□ -0.13
IFT88-202ENST00000351808 ZNF211Q13398 564 aaPredicted RBP14.22□□□□□ -0.13
IFT88-202ENST00000351808 CNNM4Q6P4Q7 775 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms