RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 AZI2Q9H6S1 392 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 RIPK3Q9Y572 518 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 GOLGA6CA6NDK9 693 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ATP9AO75110 1047 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 PGK2P07205 417 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 GOLGA6DP0CG33 693 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 RPS6KA1Q15418 735 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 HAUS6Q7Z4H7 955 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 SYT2Q8N9I0 419 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 GMCL1P1Q8NEA9 526 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 UHMK1Q8TAS1 419 aaKnown RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 MKL1Q969V6 931 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 DDX47Q9H0S4 455 aaKnown RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 GOLGA6AQ9NYA3 693 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 SPOPO43791 374 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 PON1P27169 355 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 VPS41P49754 854 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 LRRC31Q6UY01 552 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 STIM2Q9P246 746 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 WDR46O15213 610 aaKnown RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 H2AFZP0C0S5 128 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 ITGB5P18084 799 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 CNTN2Q02246 1040 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 MESDQ14696 234 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 H2AFVQ71UI9 128 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 OTUD6AQ7L8S5 288 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 OTOP1Q7RTM1 612 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 NLRP4Q96MN2 994 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 CBWD1Q9BRT8 395 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 MTFR1LQ9H019 292 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 EMSYQ7Z589 1322 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 ITGA4P13612 1032 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 SLC18A3Q16572 532 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 Q3C1V9 767 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 TAX1BP1Q86VP1 789 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
SMPD4-201ENST00000351288 METTL14Q9HCE5 456 aaKnown RBP11.28□□□□□ -0.6
SMPD4-201ENST00000351288 TLDC2A0PJX2 215 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 CALCAP01258 141 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 ICAM1P05362 532 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 HPDP32754 393 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-201ENST00000351288 ACOT2P49753 483 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 ZNF211Q13398 564 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-201ENST00000351288 DRAP1Q14919 205 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-201ENST00000351288 EPHA7Q15375 998 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 CFAP221Q4G0U5 840 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 PALB2Q86YC2 1186 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 CCDC50Q8IVM0 306 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 TAB3Q8N5C8 712 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-201ENST00000351288 PI4K2AQ9BTU6 479 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 CELF4Q9BZC1 486 aaKnown RBP11.27□□□□□ -0.6
SMPD4-201ENST00000351288 COL20A1Q9P218 1284 aa11.27□□□□□ -0.6
SMPD4-201ENST00000351288 ZC3H4Q9UPT8 1303 aaKnown RBP11.27□□□□□ -0.61
SMPD4-201ENST00000351288 WDR64B1ANS9 1081 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 GAP43P17677 238 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 TCP1P17987 556 aaKnown RBP11.27□□□□□ -0.61
SMPD4-201ENST00000351288 CCND2P30279 289 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 MXI1P50539 228 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 PDCLQ13371 301 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 AADACL2Q6P093 401 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 NSUN6Q8TEA1 469 aaKnown RBP11.27□□□□□ -0.61
SMPD4-201ENST00000351288 GANQ9H2C0 597 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 FAM184BQ9ULE4 1060 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 RAD51CO43502 376 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 CD19P15391 556 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 CD58P19256 250 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 PASD1Q8IV76 773 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.61
SMPD4-201ENST00000351288 ASTN1O14525 1302 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 NFKBIEO00221 500 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 CCT5P48643 541 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 BACE1P56817 501 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 CBWD6Q4V339 395 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 CBWD3Q5JTY5 395 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 CBWD5Q5RIA9 395 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 THNSL1Q8IYQ7 743 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 SLC16A10Q8TF71 515 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 SLC7A3Q8WY07 619 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 ZIM3Q96PE6 472 aa11.26□□□□□ -0.61
SMPD4-201ENST00000351288 PSMD1Q99460 953 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms