RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ANKLE1Q8NAG6 615 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 CEP63Q96MT8 703 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 NAP1L3Q99457 506 aaPredicted RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 BMP2KQ9NSY1 1161 aaPredicted RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 JAG2Q9Y219 1238 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 IGSF9BQ9UPX0 1349 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 DDX3YO15523 660 aaKnown RBP16.53■□□□□ 0.24
LMNA-201ENST00000347559 NPTXRO95502 500 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 GNA14O95837 355 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 USP17L8P0C7I0 530 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
LMNA-201ENST00000347559 EPHB2P29323 1055 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 SETDB1Q15047 1291 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 CCDC6Q16204 474 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 ECM1Q16610 540 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 CROCCP2Q86T23 111 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 SH3RF3Q8TEJ3 882 aaPredicted RBP16.53■□□□□ 0.24
LMNA-201ENST00000347559 ALG3Q92685 438 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 CRAMP1Q96RY5 1269 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 PITPNM3Q9BZ71 974 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 WDR35Q9P2L0 1181 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 PFASO15067 1338 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 KLRF2D3W0D1 207 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 KRT18P05783 430 aaKnown RBP16.53■□□□□ 0.24
LMNA-201ENST00000347559 PON1P27169 355 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 KCNJ1P48048 391 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 GNAQP50148 359 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 USP4Q13107 963 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 DHX34Q14147 1143 aaKnown RBP16.53■□□□□ 0.24
LMNA-201ENST00000347559 CGB2Q6NT52 195 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 VCXQ9H320 206 aa16.53■□□□□ 0.24
LMNA-201ENST00000347559 MYH3P11055 1940 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 CCNB1P14635 433 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 ZC3H12AQ5D1E8 599 aaKnown RBP16.52■□□□□ 0.24
LMNA-201ENST00000347559 MTHFD1LQ6UB35 978 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 CKAP2Q8WWK9 683 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 CTNNBL1Q8WYA6 563 aaPredicted RBP16.52■□□□□ 0.24
LMNA-201ENST00000347559 GORASP1Q9BQQ3 440 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
LMNA-201ENST00000347559 WFS1O76024 890 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 CUL3Q13618 768 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 GRM4Q14833 912 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 PHC3Q8NDX5 983 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 CRNKL1Q9BZJ0 848 aaKnown RBP16.52■□□□□ 0.24
LMNA-201ENST00000347559 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
LMNA-201ENST00000347559 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.23
LMNA-201ENST00000347559 RCN2Q14257 317 aa16.52■□□□□ 0.23
LMNA-201ENST00000347559 CCDC137Q6PK04 289 aaKnown RBP16.52■□□□□ 0.23
LMNA-201ENST00000347559 ARHGAP22Q7Z5H3 698 aa16.52■□□□□ 0.23
LMNA-201ENST00000347559 SRRM1Q8IYB3 904 aaKnown RBP16.52■□□□□ 0.23
LMNA-201ENST00000347559 FGD4Q96M96 766 aa16.52■□□□□ 0.23
LMNA-201ENST00000347559 ANKRD27Q96NW4 1050 aa16.52■□□□□ 0.23
LMNA-201ENST00000347559 UBA5Q9GZZ9 404 aa16.52■□□□□ 0.23
LMNA-201ENST00000347559 PRKAG3Q9UGI9 489 aa16.52■□□□□ 0.23
LMNA-201ENST00000347559 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.23
LMNA-201ENST00000347559 GPR75-ASB3A0A0A6YYF3 556 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 E9PMD0 336 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 TTC27Q6P3X3 843 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
LMNA-201ENST00000347559 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 CBX6O95503 412 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 RARGP13631 454 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 GNA11P29992 359 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 KIFAP3Q92845 792 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 ARHGEF26Q96DR7 871 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 BORCS6Q96GS4 357 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 POP1Q99575 1024 aaKnown RBP16.51■□□□□ 0.23
LMNA-201ENST00000347559 TBC1D10AQ9BXI6 508 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
LMNA-201ENST00000347559 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
LMNA-201ENST00000347559 NKIRAS1Q9NYS0 192 aa16.51■□□□□ 0.23
LMNA-201ENST00000347559 MARCKSL1P49006 195 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 LBRQ14739 615 aaKnown RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 PPP2R5EQ16537 467 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 PRELID2Q8N945 189 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 LNX1Q8TBB1 728 aaPredicted RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 ASAP3Q8TDY4 903 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 LRRC27Q9C0I9 530 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 CARD9Q9H257 536 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 TAOK3Q9H2K8 898 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 PCMTD2Q9NV79 361 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 SCOCQ9UIL1 159 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 NVLO15381 856 aaKnown RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 TSPY3P0CV98 308 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 TSPY8P0CW00 308 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms