RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TMEM192Q8IY95 271 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 CHAMP1Q96JM3 812 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 FTHL17Q9BXU8 183 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 NLRC5Q86WI3 1866 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 VPS37CA5D8V6 355 aaPredicted RBP17.93■□□□□ 0.46
RAB5C-201ENST00000346213 TMOD1P28289 359 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 CDC25AP30304 524 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 PTGDRQ13258 359 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 CAMK1Q14012 370 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 FBXO22Q8NEZ5 403 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 CLP1Q92989 425 aaKnown RBP17.93■□□□□ 0.46
RAB5C-201ENST00000346213 MMTAG2Q9BU76 263 aaKnown RBP17.93■□□□□ 0.46
RAB5C-201ENST00000346213 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
RAB5C-201ENST00000346213 GPR182O15218 404 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 DNAJB1P25685 340 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 POLGP54098 1239 aaPredicted RBP17.92■□□□□ 0.46
RAB5C-201ENST00000346213 TFF2Q03403 129 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 LAMTOR4Q0VGL1 99 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 LRRC55Q6ZSA7 311 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 TMEM87AQ8NBN3 555 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 LRRC15Q8TF66 581 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 COL4A3BPQ9Y5P4 624 aa17.92■□□□□ 0.46
RAB5C-201ENST00000346213 GRM6O15303 877 aa17.91■□□□□ 0.46
RAB5C-201ENST00000346213 TRAPPC10P48553 1259 aa17.91■□□□□ 0.46
RAB5C-201ENST00000346213 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
RAB5C-201ENST00000346213 CLLU1OSQ5K130 101 aa17.91■□□□□ 0.46
RAB5C-201ENST00000346213 SLC24A5Q71RS6 500 aa17.91■□□□□ 0.46
RAB5C-201ENST00000346213 KCNK18Q7Z418 384 aa17.91■□□□□ 0.46
RAB5C-201ENST00000346213 ZNF598Q86UK7 904 aaKnown RBP17.91■□□□□ 0.46
RAB5C-201ENST00000346213 PCDHGC5Q9Y5F6 944 aa17.91■□□□□ 0.46
RAB5C-201ENST00000346213 FNDC1Q4ZHG4 1894 aaPredicted RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 DENND3A2RUS2 1198 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 H3BNC9 293 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 USO1O60763 962 aaKnown RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 CSPG5O95196 566 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 CTNNB1P35222 781 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 CAPSQ13938 189 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 BTG3Q14201 252 aaPredicted RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 LONRF3Q496Y0 759 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 FERMT3Q86UX7 667 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 ECHDC2Q86YB7 292 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 FIBCD1Q8N539 461 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 IGSF22Q8N9C0 903 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 BSNDQ8WZ55 320 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 SCLT1Q96NL6 688 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 C5orf67F2Z3F1 127 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 B4GALT3O60512 393 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 EDN1P05305 212 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 SRGAP2CP0DJJ0 459 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 GLRA2P23416 452 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 HOXA11P31270 313 aaPredicted RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 ARL2P36404 184 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 BMPR1AP36894 532 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 RFC5P40937 340 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 GRIN1Q05586 938 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 ORC2Q13416 577 aaPredicted RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 AMHR2Q16671 573 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 UBXN11Q5T124 520 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 CMTR2Q8IYT2 770 aaKnown RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 NEK9Q8TD19 979 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 SLC7A3Q8WY07 619 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 LPPQ93052 612 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 CASD1Q96PB1 797 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
RAB5C-201ENST00000346213 CWH43Q9H720 699 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 ANKEF1Q9NU02 776 aa17.9■□□□□ 0.46
RAB5C-201ENST00000346213 RALGAPA2Q2PPJ7 1873 aa17.89■□□□□ 0.46
RAB5C-201ENST00000346213 TTLL13PA6NNM8 815 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 MBD3O95983 291 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 PBX3P40426 434 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 AFF1P51825 1210 aaKnown RBP17.89■□□□□ 0.45
RAB5C-201ENST00000346213 GPM6BQ13491 265 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 MAEAQ7L5Y9 396 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 ZNF410Q86VK4 478 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 MTRQ99707 1265 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 GCOM2Q9BZD3 368 aaPredicted RBP17.89■□□□□ 0.45
RAB5C-201ENST00000346213 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
RAB5C-201ENST00000346213 ALG13Q9NP73 1137 aaKnown RBP17.89■□□□□ 0.45
RAB5C-201ENST00000346213 TBKBP1A7MCY6 615 aa17.88■□□□□ 0.45
RAB5C-201ENST00000346213 RPA1P27694 616 aa17.88■□□□□ 0.45
RAB5C-201ENST00000346213 RNF149Q8NC42 400 aa17.88■□□□□ 0.45
RAB5C-201ENST00000346213 PSPC1Q8WXF1 523 aaKnown RBP17.88■□□□□ 0.45
RAB5C-201ENST00000346213 COL25A1Q9BXS0 654 aaPredicted RBP17.88■□□□□ 0.45
RAB5C-201ENST00000346213 C1orf112Q9NSG2 853 aa17.88■□□□□ 0.45
RAB5C-201ENST00000346213 TMEM161AQ9NX61 479 aa17.88■□□□□ 0.45
RAB5C-201ENST00000346213 NOL7Q9UMY1 257 aaKnown RBP17.88■□□□□ 0.45
RAB5C-201ENST00000346213 USP20Q9Y2K6 914 aa17.88■□□□□ 0.45
RAB5C-201ENST00000346213 B4GALT5O43286 388 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 DKC1O60832 514 aaKnown RBP eCLIP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 ITGB1P05556 798 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 IRS1P35568 1242 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 ATP2C1P98194 919 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 CSPP1Q1MSJ5 1256 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 FOXD4L6Q3SYB3 417 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 FOXD4L3Q6VB84 417 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms