RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 STXBP5LQ9Y2K9 1186 aa23.14■■□□□ 1.29
TRIM3-201ENST00000345851 FLOT1O75955 427 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 ALDH1B1P30837 517 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 ABL2P42684 1182 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 CDK8P49336 464 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 C10orf76Q5T2E6 689 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 SOGA3Q5TF21 947 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 DGKHQ86XP1 1220 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 AMFRQ9UKV5 643 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 NPHP3-ACAD11A0A0J9YXS1 232 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 KRT13P13646 458 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 EIF6P56537 245 aaKnown RBP23.13■■□□□ 1.29
TRIM3-201ENST00000345851 MAP2K1Q02750 393 aaPredicted RBP23.13■■□□□ 1.29
TRIM3-201ENST00000345851 SLMAPQ14BN4 828 aa23.13■■□□□ 1.29
TRIM3-201ENST00000345851 DDX4Q9NQI0 724 aaKnown RBP23.13■■□□□ 1.29
TRIM3-201ENST00000345851 USP15Q9Y4E8 981 aaPredicted RBP23.13■■□□□ 1.29
TRIM3-201ENST00000345851 TCP11X1B4DZS4 312 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 PDE6CP51160 858 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 KLRC3Q07444 240 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 PSMD2Q13200 908 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 DUPD1Q68J44 220 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 DEFB132Q7Z7B7 95 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 KIAA0825Q8IV33 1275 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 DNAJC19Q96DA6 116 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 ATP2A2P16615 1042 aaKnown RBP23.12■■□□□ 1.29
TRIM3-201ENST00000345851 MSH2P43246 934 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 COPS2P61201 443 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 DCAF12L1Q5VU92 463 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 ADAM22Q9P0K1 906 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 LAMB1P07942 1786 aa23.12■■□□□ 1.29
TRIM3-201ENST00000345851 TAF11Q15544 211 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 GJB7Q6PEY0 223 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 SLFN11Q7Z7L1 901 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 REXO1Q8N1G1 1221 aaKnown RBP23.11■■□□□ 1.29
TRIM3-201ENST00000345851 HES6Q96HZ4 224 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 CEP63Q96MT8 703 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 AJAP1Q9UKB5 411 aaPredicted RBP23.11■■□□□ 1.29
TRIM3-201ENST00000345851 PPP1R9AQ9ULJ8 1098 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 CORO1CQ9ULV4 474 aaPredicted RBP23.11■■□□□ 1.29
TRIM3-201ENST00000345851 ABCB4P21439 1286 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 GNA11P29992 359 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 PTENP60484 403 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 CNGA2Q16280 664 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 NUGGCQ68CJ6 796 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 MTMR9Q96QG7 549 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 EYA3Q99504 573 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
TRIM3-201ENST00000345851 HDAC9Q9UKV0 1011 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
TRIM3-201ENST00000345851 BLMHQ13867 455 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 AADACL2Q6P093 401 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 ZDHHC24Q6UX98 284 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 CNKSR1Q969H4 720 aa23.11■■□□□ 1.29
TRIM3-201ENST00000345851 RPTORQ8N122 1335 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 AGTP01019 485 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 LINGO3P0C6S8 592 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 ICA1Q05084 483 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 HERC4Q5GLZ8 1057 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-201ENST00000345851 DCAF17Q5H9S7 520 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-201ENST00000345851 JAMLQ86YT9 394 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 SYCE1Q8N0S2 351 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 TMEM47Q9BQJ4 181 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 OSBPL1AQ9BXW6 950 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 H0YIN7 160 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 CREB1P16220 341 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 GALCP54803 685 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 LACTBP83111 547 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-201ENST00000345851 KIAA1755Q5JYT7 1200 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 C6orf118Q5T5N4 469 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 TCERG1LQ5VWI1 586 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 USP17L2Q6R6M4 530 aa23.1■■□□□ 1.29
TRIM3-201ENST00000345851 PALM3A6NDB9 673 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-201ENST00000345851 FOXO6A8MYZ6 492 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 DDX3XO00571 662 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIM3-201ENST00000345851 GNA14O95837 355 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 NR2F2P24468 414 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 ATP11AP98196 1134 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 BNIP1Q12981 228 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 CCDC25Q86WR0 208 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 ANKRD42Q8N9B4 389 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 SLC17A8Q8NDX2 589 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 FLAD1Q8NFF5 587 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 SUN1O94901 812 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 ADCY2Q08462 1091 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 EXOC3L4Q17RC7 722 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 GALNTL6Q49A17 601 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 C18orf8Q96DM3 657 aa23.09■■□□□ 1.29
TRIM3-201ENST00000345851 CDK5RAP2Q96SN8 1893 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 RASGRF2O14827 1237 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 ZNF131P52739 623 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 FITM2Q8N6M3 262 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 GDAP1Q8TB36 358 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 SCFD1Q8WVM8 642 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 PIGSQ96S52 555 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 TMOD4Q9NZQ9 345 aa23.08■■□□□ 1.29
TRIM3-201ENST00000345851 BZW2Q9Y6E2 419 aaKnown RBP23.08■■□□□ 1.29
TRIM3-201ENST00000345851 GOLGA6L10A0A0M3HER8 536 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms