RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 COL4A3BPQ9Y5P4 624 aa10.17□□□□□ -0.78
ATG4A-202ENST00000345734 TLL2Q9Y6L7 1015 aa10.17□□□□□ -0.78
ATG4A-202ENST00000345734 MYPNQ86TC9 1320 aa10.17□□□□□ -0.78
ATG4A-202ENST00000345734 RGS20O76081 388 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 FAM13AO94988 1023 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 CCNE2O96020 404 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 ERVK-24P63145 666 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 FKBP3Q00688 224 aaKnown RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 TRIM14Q14142 442 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 MAN2A1Q16706 1144 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 UGCGQ16739 394 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 CCDC51Q96ER9 411 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 TBC1D22BQ9NU19 505 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 A0A0G2JLL6 359 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 TMEM150BA6NC51 233 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 GCNT3O95395 438 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 P4HBP07237 508 aaKnown RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 FSHRP23945 695 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 NMT1P30419 496 aaKnown RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 GPR162Q16538 588 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 KNOP1Q1ED39 458 aaKnown RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 LBX2Q6XYB7 198 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 PRRT2Q7Z6L0 340 aaPredicted RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 MYCT1Q8N699 235 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 NEK9Q8TD19 979 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 NSUN6Q8TEA1 469 aaKnown RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 SH2D3AQ9BRG2 576 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 NAA15Q9BXJ9 866 aaKnown RBP10.16□□□□□ -0.78
ATG4A-202ENST00000345734 TTYH3Q9C0H2 523 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 IKZF4Q9H2S9 585 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 NDST4Q9H3R1 872 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 ZSWIM4Q9H7M6 989 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 AGPAT5Q9NUQ2 364 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 SEPT3Q9UH03 358 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 TELO2Q9Y4R8 837 aa10.16□□□□□ -0.78
ATG4A-202ENST00000345734 A0A0U1RQJ8 604 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ARHGEF35A5YM69 484 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 GAP43P17677 238 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 NF2P35240 595 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 QARSP47897 775 aaKnown RBP10.15□□□□□ -0.78
ATG4A-202ENST00000345734 KCNC4Q03721 635 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 PPATQ06203 517 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 FSTL1Q12841 308 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ADAM9Q13443 819 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 CCDC40Q4G0X9 1142 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ZC2HC1CQ53FD0 456 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-202ENST00000345734 FKBP15Q5T1M5 1219 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 XRRA1Q6P2D8 792 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 TRMT1LQ7Z2T5 733 aaKnown RBP10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ERO1BQ86YB8 467 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 KSR1Q8IVT5 923 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ZC3H3Q8IXZ2 948 aaKnown RBP10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ANKRD13AQ8IZ07 590 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 CCDC155Q8N6L0 562 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 MYRIPQ8NFW9 859 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ATRIPQ8WXE1 791 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 CEP63Q96MT8 703 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ERGIC2Q96RQ1 377 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 YY1AP1Q9H869 796 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 PARVGQ9HBI0 331 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 CYLDQ9NQC7 956 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 CXXC1Q9P0U4 656 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-202ENST00000345734 CAPN11Q9UMQ6 739 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 ASTN1O14525 1302 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 MYH9P35579 1960 aaKnown RBP10.15□□□□□ -0.78
ATG4A-202ENST00000345734 SCN4AP35499 1836 aa10.15□□□□□ -0.78
ATG4A-202ENST00000345734 GLTPD2A6NH11 291 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 CCP110O43303 1012 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 ZSCAN12O43309 604 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 SORBS3O60504 671 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 HIP1RO75146 1068 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 TRIM21P19474 475 aaKnown RBP10.15□□□□□ -0.79
ATG4A-202ENST00000345734 NR2F2P24468 414 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 CNTN2Q02246 1040 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 BMT2Q1RMZ1 405 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 SYT10Q6XYQ8 523 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 GPRASP2Q96D09 838 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 INPP4AQ96PE3 977 aaPredicted RBP10.15□□□□□ -0.79
ATG4A-202ENST00000345734 FIZ1Q96SL8 496 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 CHP1Q99653 195 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 TAF1DQ9H5J8 278 aaPredicted RBP10.15□□□□□ -0.79
ATG4A-202ENST00000345734 OLFML3Q9NRN5 406 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 SIK3Q9Y2K2 1263 aa10.15□□□□□ -0.79
ATG4A-202ENST00000345734 LUC7L2Q9Y383 392 aaKnown RBP10.15□□□□□ -0.79
ATG4A-202ENST00000345734 VGLL3A8MV65 326 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 EPHB6O15197 1021 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 KCNA2P16389 499 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 RARRES1P49788 294 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF131P52739 623 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 MAPK7Q13164 816 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 EDRF1Q3B7T1 1238 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 TRIM65Q6PJ69 517 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 NLRX1Q86UT6 975 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 DAW1Q8N136 415 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 ANKRD35Q8N283 1001 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms