RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 SPATC1LQ9H0A9 340 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 NUCKS1Q9H1E3 243 aaKnown RBP9.39□□□□□ -0.91
SKAP2-201ENST00000345317 ASCC2Q9H1I8 757 aaPredicted RBP9.39□□□□□ -0.91
SKAP2-201ENST00000345317 RRAGCQ9HB90 399 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 MYH7P12883 1935 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 EPHB6O15197 1021 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 ZNF185O15231 689 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 TMOD1P28289 359 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 SLC7A5Q01650 507 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 SMC1AQ14683 1233 aaKnown RBP9.39□□□□□ -0.91
SKAP2-201ENST00000345317 EPC2Q52LR7 807 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 C8orf74Q6P047 294 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 BTNL9Q6UXG8 535 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 IRF2BP1Q8IU81 584 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 LMBR1Q8WVP7 490 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 TRAPPC12Q8WVT3 735 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 PNMA3Q9UL41 463 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 TBC1D12O60347 775 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 ERLIN2O94905 339 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 ABL1P00519 1130 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 SERPING1P05155 500 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 FDX1P10109 184 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 CYP2B6P20813 491 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 SLC12A3P55017 1021 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 KCTD19Q17RG1 926 aaPredicted RBP9.39□□□□□ -0.91
SKAP2-201ENST00000345317 ARSHQ5FYA8 562 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 TAX1BP1Q86VP1 789 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 CCDC25Q86WR0 208 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 REXO1L1PQ8IX06 675 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 PROCA1Q8NCQ7 364 aaPredicted RBP9.39□□□□□ -0.91
SKAP2-201ENST00000345317 MCPH1Q8NEM0 835 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 SPATA20Q8TB22 786 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 KIFAP3Q92845 792 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 TARS2Q9BW92 718 aaKnown RBP9.39□□□□□ -0.91
SKAP2-201ENST00000345317 VPS33BQ9H267 617 aa9.39□□□□□ -0.91
SKAP2-201ENST00000345317 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 GSTTP1A0A1W2PQM5 241 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 ZNF233A6NK53 670 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 CLDN3O15551 220 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 PSMD10O75832 226 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 ATP1A1P05023 1023 aaKnown RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 UCHL3P15374 230 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 TCF7P36402 384 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 RARRES1P49788 294 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 ZNF157P51786 506 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 VAV2P52735 878 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 HIRAP54198 1017 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 ITGB3BPQ13352 177 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 SNAPC2Q13487 334 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 NEDD9Q14511 834 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 FASTKD5Q7L8L6 764 aaKnown RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 CBWD2Q8IUF1 395 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 LACRTQ9GZZ8 138 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 AGPAT3Q9NRZ7 376 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 CEP72Q9P209 647 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 PCDHB4Q9Y5E5 795 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 N4BP2Q86UW6 1770 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 UGCGQ16739 394 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 PCNX4Q63HM2 1172 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 NFRKBQ6P4R8 1299 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 MOXD1Q6UVY6 613 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 COPS5Q92905 334 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 PITPNM2Q9BZ72 1349 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 SPDYE16A6NNV3 312 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 NKRFO15226 690 aaKnown RBP eCLIP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 MAP2K2P36507 400 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 VPS41P49754 854 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 MRPS9P82933 396 aaKnown RBP9.38□□□□□ -0.91
SKAP2-201ENST00000345317 LRRN4CLQ8ND94 238 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 NEK9Q8TD19 979 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 YY1AP1Q9H869 796 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 VPS18Q9P253 973 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 PDE4DIPQ5VU43 2346 aa9.38□□□□□ -0.91
SKAP2-201ENST00000345317 DDX60Q8IY21 1712 aaKnown RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 GOLGA6L10A6NI86 522 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 DYNC1LI2O43237 492 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 PALMO75781 387 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 PLS3P13797 630 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 GUCY2FP51841 1108 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 PPP2R5AQ15172 486 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 BRDTQ58F21 947 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 INTS8Q75QN2 995 aaKnown RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 CCDC170Q8IYT3 715 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 TAB3Q8N5C8 712 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 SLC5A5Q92911 643 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 INTS2Q9H0H0 1204 aaKnown RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 TOPORSQ9NS56 1045 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 CPA4Q9UI42 421 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 CACNA1SQ13698 1873 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 PHLPP2Q6ZVD8 1323 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-201ENST00000345317 PDE6CP51160 858 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 IFFO1Q0D2I5 559 aa9.37□□□□□ -0.91
SKAP2-201ENST00000345317 TTLL4Q14679 1199 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms