RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SLC12A3P55017 1021 aa23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 RAD51AP2Q09MP3 1159 aa23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 MCM6Q14566 821 aa23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 ASAP3Q8TDY4 903 aa23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 BLOC1S4Q9NUP1 217 aa23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 ST3GAL5Q9UNP4 418 aa23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 EFCAB14O75071 495 aa23.07■■□□□ 1.28
SMARCB1-202ENST00000344921 GLRA2P23416 452 aa23.07■■□□□ 1.28
SMARCB1-202ENST00000344921 C1orf186Q6ZWK4 172 aa23.07■■□□□ 1.28
SMARCB1-202ENST00000344921 FAM228AQ86W67 206 aa23.07■■□□□ 1.28
SMARCB1-202ENST00000344921 KIFAP3Q92845 792 aa23.07■■□□□ 1.28
SMARCB1-202ENST00000344921 STK17AQ9UEE5 414 aa23.07■■□□□ 1.28
SMARCB1-202ENST00000344921 LRRIQ4A6NIV6 560 aa23.06■■□□□ 1.28
SMARCB1-202ENST00000344921 PHKA2P46019 1235 aa23.06■■□□□ 1.28
SMARCB1-202ENST00000344921 GPBP1Q86WP2 473 aa23.06■■□□□ 1.28
SMARCB1-202ENST00000344921 LRRC15Q8TF66 581 aa23.06■■□□□ 1.28
SMARCB1-202ENST00000344921 IFT74Q96LB3 600 aa23.06■■□□□ 1.28
SMARCB1-202ENST00000344921 IFT122Q9HBG6 1241 aa23.06■■□□□ 1.28
SMARCB1-202ENST00000344921 KRT18P05783 430 aaKnown RBP23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 FGFR4P22455 802 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 SFPQP23246 707 aaKnown RBP eCLIP23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 CAPSQ13938 189 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 ADALQ6DHV7 355 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 FTHL17Q9BXU8 183 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 KCND2Q9NZV8 630 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 A0A087X0B3 334 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 HIP1RO75146 1068 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 WDR5P61964 334 aaKnown RBP23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 RASIP1Q5U651 963 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 RESP18Q5W5W9 173 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 DRC1Q96MC2 740 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 TIPINQ9BVW5 301 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 ERVK-5Q9HDB9 667 aa23.05■■□□□ 1.28
SMARCB1-202ENST00000344921 PPP2R5AQ15172 486 aa23.04■■□□□ 1.28
SMARCB1-202ENST00000344921 SV2BQ7L1I2 683 aa23.04■■□□□ 1.28
SMARCB1-202ENST00000344921 CATSPER4Q7RTX7 472 aa23.04■■□□□ 1.28
SMARCB1-202ENST00000344921 SRGAP1Q7Z6B7 1085 aa23.04■■□□□ 1.28
SMARCB1-202ENST00000344921 NPHP3-ACAD11A0A0J9YXS1 232 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 DENND3A2RUS2 1198 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 AMHP03971 560 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 ATP2A2P16615 1042 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 ZSCAN20P17040 1043 aaPredicted RBP23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 GUCY2CP25092 1073 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 PTENP60484 403 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 HABP4Q5JVS0 413 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 MYOCDQ8IZQ8 938 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 DHX58Q96C10 678 aa23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 LAMA2P24043 3122 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-202ENST00000344921 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 SFI1A8K8P3 1242 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 INO80B-WBP1J3KQ70 363 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 POLR2DO15514 142 aaKnown RBP23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 IBSPP21815 317 aaPredicted RBP23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 DEFB103AP81534 67 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 CACNB1Q02641 598 aaPredicted RBP23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 POU5F1BQ06416 359 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 NAALADL2Q58DX5 795 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 IQUBQ8NA54 791 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 SLC9A7Q96T83 725 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 MINDY3Q9H8M7 445 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 LAMA3Q16787 3333 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 MICAL3Q7RTP6 2002 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 TRIOBPQ9H2D6 2365 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 GOLGA6L4A6NEF3 574 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 CCDC169A6NNP5 214 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 NAMPTP43490 491 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 LRIT3Q3SXY7 679 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 ARSHQ5FYA8 562 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 ZBTB8OSQ8IWT0 167 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 DEPTORQ8TB45 409 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 BSNDQ8WZ55 320 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 ADAM2Q99965 735 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 TMX1Q9H3N1 280 aa23.02■■□□□ 1.28
SMARCB1-202ENST00000344921 A0A1B0GVL5 298 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 GRXCR1A8MXD5 290 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 ENPP3O14638 875 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 ERLIN2O94905 339 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 CMA1P23946 247 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 PEX3P56589 373 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 DMP1Q13316 513 aaPredicted RBP23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 PHOSPHO2Q8TCD6 241 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 REEP2Q9BRK0 252 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 ZBED2Q9BTP6 218 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 ZHX3Q9H4I2 956 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 KCNH3Q9ULD8 1083 aa23.01■■□□□ 1.27
SMARCB1-202ENST00000344921 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23■■□□□ 1.27
SMARCB1-202ENST00000344921 UPP2O95045 317 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 FAM109BQ6ICB4 259 aaPredicted RBP23■■□□□ 1.27
SMARCB1-202ENST00000344921 FAM117BQ6P1L5 589 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 DYMQ7RTS9 669 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 TMCO2Q7Z6W1 182 aaPredicted RBP23■■□□□ 1.27
SMARCB1-202ENST00000344921 DAW1Q8N136 415 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 PYM1Q9BRP8 204 aaKnown RBP23■■□□□ 1.27
SMARCB1-202ENST00000344921 NFKBIZQ9BYH8 718 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 C2orf40Q9H1Z8 148 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 ODF2LQ9ULJ1 636 aa23■■□□□ 1.27
SMARCB1-202ENST00000344921 PIN4Q9Y237 131 aaKnown RBP23■■□□□ 1.27
SMARCB1-202ENST00000344921 FAM13AO94988 1023 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms