RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KMT5AQ9NQR1 393 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 AJAP1Q9UKB5 411 aaPredicted RBP14.87□□□□□ -0.03
CDC42-202ENST00000344548 GOLGA8IPA6NC78 632 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 GOLGA8JA6NMD2 632 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 ZBTB42B2RXF5 422 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 DKC1O60832 514 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDC42-202ENST00000344548 AFPP02771 609 aaKnown RBP14.87□□□□□ -0.03
CDC42-202ENST00000344548 ADCYAP1R1P41586 468 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 POLGP54098 1239 aaPredicted RBP14.87□□□□□ -0.03
CDC42-202ENST00000344548 DMP1Q13316 513 aaPredicted RBP14.87□□□□□ -0.03
CDC42-202ENST00000344548 CBWD6Q4V339 395 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 CBWD3Q5JTY5 395 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 CBWD5Q5RIA9 395 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 SYT10Q6XYQ8 523 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 RRAGAQ7L523 313 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 AFAP1L1Q8TED9 768 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 PARK7Q99497 189 aaKnown RBP14.87□□□□□ -0.03
CDC42-202ENST00000344548 FAM184BQ9ULE4 1060 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 TRPM7Q96QT4 1865 aa14.87□□□□□ -0.03
CDC42-202ENST00000344548 TLR2O60603 784 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 EXOC3O60645 756 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 GLRA2P23416 452 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 POLR2FP61218 127 aaKnown RBP14.86□□□□□ -0.03
CDC42-202ENST00000344548 GRB14Q14449 540 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 FAM110CQ1W6H9 321 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 GJB7Q6PEY0 223 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 SLC9A9Q8IVB4 645 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 TRAPPC12Q8WVT3 735 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 KIFAP3Q92845 792 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 GANQ9H2C0 597 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 TMEM206Q9H813 350 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 LZTFL1Q9NQ48 299 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 ARHGAP20Q9P2F6 1191 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 PLAGL2Q9UPG8 496 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 ADGRA2Q96PE1 1338 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 ASB14A6NK59 587 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 ADCY6O43306 1168 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 EDN1P05305 212 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 PON1P27169 355 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 CNGA1P29973 690 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 ARHGAP1Q07960 439 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
CDC42-202ENST00000344548 MAP4K3Q8IVH8 894 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 MCPH1Q8NEM0 835 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 NEK11Q8NG66 645 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 SPIRE2Q8WWL2 714 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 GLG1Q92896 1179 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
CDC42-202ENST00000344548 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.86□□□□□ -0.03
CDC42-202ENST00000344548 EPN1Q9Y6I3 576 aaPredicted RBP14.86□□□□□ -0.03
CDC42-202ENST00000344548 NOP56O00567 594 aaKnown RBP14.85□□□□□ -0.03
CDC42-202ENST00000344548 ZNF263O14978 683 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 LGR5O75473 907 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 NDUFA10O95299 355 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 C1orf220Q5T0J3 134 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 SAAL1Q96ER3 474 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 WDR24Q96S15 920 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 RNPEPQ9H4A4 650 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 METTL14Q9HCE5 456 aaKnown RBP14.85□□□□□ -0.03
CDC42-202ENST00000344548 SIX2Q9NPC8 291 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 HSPBP1Q9NZL4 362 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 ARHGAP28Q9P2N2 729 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 TRIM10Q9UDY6 481 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 IVNS1ABPQ9Y6Y0 642 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
CDC42-202ENST00000344548 STRNO43815 780 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 ADRB2P07550 413 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 CCDC175P0C221 793 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 ARL2P36404 184 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 SMTNP53814 917 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 TTLL4Q14679 1199 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 DPP9Q86TI2 863 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 CBWD2Q8IUF1 395 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 ABRAQ8N0Z2 381 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 SCFD2Q8WU76 684 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 TSC1Q92574 1164 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 FAM84AQ96KN4 292 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 MPHOSPH6Q99547 160 aaKnown RBP14.85□□□□□ -0.03
CDC42-202ENST00000344548 MKNK1Q9BUB5 465 aa14.85□□□□□ -0.03
CDC42-202ENST00000344548 NHEJ1Q9H9Q4 299 aaPredicted RBP14.85□□□□□ -0.03
CDC42-202ENST00000344548 DIS3Q9Y2L1 958 aaKnown RBP14.85□□□□□ -0.03
CDC42-202ENST00000344548 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 RCCD1A6NED2 376 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 TTLL13PA6NNM8 815 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 ZSCAN12O43309 604 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 HNRNPH3P31942 346 aaKnown RBP14.84□□□□□ -0.03
CDC42-202ENST00000344548 ARHGAP25P42331 645 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 ALCAMQ13740 583 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 PLCB4Q15147 1175 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 PRAMEF19Q5SWL8 479 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 HGSNATQ68CP4 663 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 RGMBQ6NW40 437 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 PDXDC1Q6P996 788 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 KCNV1Q6PIU1 500 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 PLEKHH3Q7Z736 793 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 LRRC71Q8N4P6 559 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 FRMD4BQ9Y2L6 1034 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 FHOD1Q9Y613 1164 aa14.84□□□□□ -0.03
CDC42-202ENST00000344548 GJB1P08034 283 aa14.83□□□□□ -0.03
CDC42-202ENST00000344548 PNMA6AP0CW24 399 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms