RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 AAASQ9NRG9 546 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 RALGAPA2Q2PPJ7 1873 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 PRRC2BQ5JSZ5 2229 aaKnown RBP17.91■□□□□ 0.46
ATG4B-201ENST00000344376 PRUNE2Q8WUY3 3088 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 ZBTB39O15060 712 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 LINC00271P0C7V0 271 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 XRCC6P12956 609 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATG4B-201ENST00000344376 LAMTOR4Q0VGL1 99 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 NAALADL2Q58DX5 795 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 HAUS3Q68CZ6 603 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 RNF169Q8NCN4 708 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 P2RX5Q93086 422 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 HLA-CQ95604 372 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 ASB2Q96Q27 587 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 POLR3CQ9BUI4 534 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-201ENST00000344376 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 PIN4Q9Y237 131 aaKnown RBP17.91■□□□□ 0.46
ATG4B-201ENST00000344376 SRGAP2CP0DJJ0 459 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 PHKA2P46019 1235 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 TFDP1Q14186 410 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 MXD4Q14582 209 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-201ENST00000344376 FAM102BQ5T8I3 360 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 TWF2Q6IBS0 349 aaKnown RBP17.9■□□□□ 0.46
ATG4B-201ENST00000344376 SRGAP1Q7Z6B7 1085 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 FERMT3Q86UX7 667 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 ECHDC2Q86YB7 292 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 PIGOQ8TEQ8 1089 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 COL25A1Q9BXS0 654 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-201ENST00000344376 BACH2Q9BYV9 841 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 STK24Q9Y6E0 443 aa17.9■□□□□ 0.46
ATG4B-201ENST00000344376 A0A0U1RQF3 1178 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 LAD1O00515 517 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 FGFR1P11362 822 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 SKIP12755 728 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 RARRES1P49788 294 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
ATG4B-201ENST00000344376 NBR1Q14596 966 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 RILPL1Q5EBL4 403 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 NLRC5Q86WI3 1866 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 CATSPER3Q86XQ3 398 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 RNF149Q8NC42 400 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 NACC1Q96RE7 527 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 IFT122Q9HBG6 1241 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 PCDHB12Q9Y5F1 795 aa17.89■□□□□ 0.45
ATG4B-201ENST00000344376 A0A0C4DFX4 3053 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 EOMESO95936 686 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 SPATA31C1P0DKV0 1188 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 RPA1P27694 616 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 RAB27AP51159 221 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 CSPP1Q1MSJ5 1256 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 NSUN3Q9H649 340 aaKnown RBP17.88■□□□□ 0.45
ATG4B-201ENST00000344376 XPNPEP1Q9NQW7 623 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 LRWD1Q9UFC0 647 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 DBR1Q9UK59 544 aaKnown RBP17.88■□□□□ 0.45
ATG4B-201ENST00000344376 PCDHB6Q9Y5E3 794 aa17.88■□□□□ 0.45
ATG4B-201ENST00000344376 GRM6O15303 877 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 USO1O60763 962 aaKnown RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 MED24O75448 989 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 MUTP22033 750 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 TOB1P50616 345 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 PTGDRQ13258 359 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 PCBP1Q15365 356 aaKnown RBP eCLIP17.87■□□□□ 0.452e-7■■□□□ 14.5
ATG4B-201ENST00000344376 LRRC43Q8N309 656 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 RSPH1Q8WYR4 309 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 TRAIPQ9BWF2 469 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 AGPAT5Q9NUQ2 364 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 PLAGL2Q9UPG8 496 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 ERLIN2O94905 339 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 LAG3P18627 525 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 CCT6AP40227 531 aaKnown RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 TFF2Q03403 129 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 POTEGQ6S5H5 508 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 C4orf32Q8N8J7 132 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 KLHL23Q8NBE8 558 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 MCPH1Q8NEM0 835 aa17.87■□□□□ 0.45
ATG4B-201ENST00000344376 MRPL9Q9BYD2 267 aaKnown RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 ALG13Q9NP73 1137 aaKnown RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 TYW1Q9NV66 732 aaKnown RBP17.87■□□□□ 0.45
ATG4B-201ENST00000344376 ARID2Q68CP9 1835 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 ARHGEF35A5YM69 484 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 PRPHP41219 470 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 POU5F1BQ06416 359 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 NCBP1Q09161 790 aaKnown RBP17.86■□□□□ 0.45
ATG4B-201ENST00000344376 PDIA5Q14554 519 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 TCEAL5Q5H9L2 206 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 ZNF598Q86UK7 904 aaKnown RBP17.86■□□□□ 0.45
ATG4B-201ENST00000344376 THNSL1Q8IYQ7 743 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 PPP2R3CQ969Q6 453 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 CASD1Q96PB1 797 aa17.86■□□□□ 0.45
ATG4B-201ENST00000344376 POLR3FQ9H1D9 316 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-201ENST00000344376 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.86■□□□□ 0.45
ATG4B-201ENST00000344376 A0A087WWV3 80 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 ITGB1P05556 798 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 ARL2P36404 184 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 PTENP60484 403 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 DTHD1Q6ZMT9 781 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 COLGALT1Q8NBJ5 622 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 HELQQ8TDG4 1101 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms