RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 CPDO75976 1380 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
KPNA1-201ENST00000344337 LOC100653049A0A140TA62 436 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 DGKIO75912 1065 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 KRT34O76011 436 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 ZRANB2O95218 330 aaKnown RBP eCLIP8.37□□□□□ -1.07
KPNA1-201ENST00000344337 PDE1BQ01064 536 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 FAXCQ5TGI0 409 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 TRIM59Q8IWR1 403 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 ADSSL1Q8N142 457 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 CEP120Q8N960 986 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 ERP27Q96DN0 273 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 CSRNP1Q96S65 589 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 FAM213AQ9BRX8 229 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 XAB2Q9HCS7 855 aaKnown RBP8.37□□□□□ -1.07
KPNA1-201ENST00000344337 CCPG1Q9ULG6 757 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
KPNA1-201ENST00000344337 ABCB11O95342 1321 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 RSRC2Q7L4I2 434 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 TDRD3Q9H7E2 651 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 SYF2O95926 243 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 GH2P01242 217 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 KRT17Q04695 432 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 OLFML2BQ68BL8 750 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 C1orf228Q6PIY5 440 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 PPM1NQ8N819 430 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 UNKQ9C0B0 810 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 PPP1R9AQ9ULJ8 1098 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 ABCA8O94911 1581 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 UTRNP46939 3433 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 ERVV-2B6SEH9 535 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 TRIM37O94972 964 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 TMEM154Q6P9G4 183 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 SLC26A7Q8TE54 656 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 EMSYQ7Z589 1322 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 TMEM150BA6NC51 233 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 AKR1B1P15121 316 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 ATP6V1B1P15313 513 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 ITKQ08881 620 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 COG2Q14746 738 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 SLMAPQ14BN4 828 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 UNC13DQ70J99 1090 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 PPP4R1Q8TF05 950 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 FAM149B1Q96BN6 582 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 PACSIN3Q9UKS6 424 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 NOP56O00567 594 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 NEMP1O14524 444 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 ZBED4O75132 1171 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 MYCP01106 439 aaPredicted RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 SRGNP10124 158 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 CYTH1Q15438 398 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 PRAMEF18Q5VWM3 479 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 TRAPPC11Q7Z392 1133 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 NGRNQ9NPE2 291 aaKnown RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 RNF19AQ9NV58 838 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 SCHIP1Q9P0W5 487 aaPredicted RBP8.36□□□□□ -1.07
KPNA1-201ENST00000344337 SERPINB13Q9UIV8 391 aa8.36□□□□□ -1.07
KPNA1-201ENST00000344337 GJB6O95452 261 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 MT-ND3P03897 115 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 LMNB1P20700 586 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 MXI1P50539 228 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 TMPRSS15P98073 1019 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 PTGISQ16647 500 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 PARP10Q53GL7 1025 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 DARS2Q6PI48 645 aaKnown RBP8.35□□□□□ -1.07
KPNA1-201ENST00000344337 TMEM270Q6UE05 265 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 C4orf50Q6ZRC1 276 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 KCNB2Q92953 911 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 CEP170P1Q96L14 293 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 FAF1Q9UNN5 650 aaPredicted RBP8.35□□□□□ -1.07
KPNA1-201ENST00000344337 SDK1Q7Z5N4 2213 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 TMEM120BA0PK00 339 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 GNA14O95837 355 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 THNSL1Q8IYQ7 743 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 PHF20Q9BVI0 1012 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 NUF2Q9BZD4 464 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 PARVGQ9HBI0 331 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 NOD2Q9HC29 1040 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 ZFP69BQ9UJL9 534 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
KPNA1-201ENST00000344337 MYH7P12883 1935 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 A8MUI8 341 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 CRCPO75575 148 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 ACOT2P49753 483 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
KPNA1-201ENST00000344337 ABCB5Q2M3G0 1257 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 MMEL1Q495T6 779 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 CCDC93Q567U6 631 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 C1orf146Q5VVC0 180 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 EFCAB3Q8N7B9 438 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 RAD54LQ92698 747 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.071e-8■■■■□ 22.3
KPNA1-201ENST00000344337 SEMA6BQ9H3T3 888 aa8.35□□□□□ -1.07
KPNA1-201ENST00000344337 UBOX5O94941 541 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms