RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RAVER2Q9HCJ3 691 aaKnown RBP23.28■■□□□ 1.32
CCDC38-201ENST00000344280 SAMM50Q9Y512 469 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 PHF20L1A8MW92 1017 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 CES2O00748 559 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 RPS6KA5O75582 802 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 ALAS1P13196 640 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 DPEP1P16444 411 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 ABCB4P21439 1286 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 PPP2R5AQ15172 486 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 TKFCQ3LXA3 575 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 NT5DC3Q86UY8 548 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 ACTRT1Q8TDG2 376 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 CBWD1Q9BRT8 395 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 BCRP11274 1271 aa23.27■■□□□ 1.32
CCDC38-201ENST00000344280 RARRES1P49788 294 aa23.27■■□□□ 1.32
CCDC38-201ENST00000344280 PBKQ96KB5 322 aa23.27■■□□□ 1.32
CCDC38-201ENST00000344280 CCDC43Q96MW1 224 aaKnown RBP23.27■■□□□ 1.32
CCDC38-201ENST00000344280 AGO4Q9HCK5 861 aaKnown RBP23.27■■□□□ 1.32
CCDC38-201ENST00000344280 NOC2LQ9Y3T9 749 aaKnown RBP23.27■■□□□ 1.32
CCDC38-201ENST00000344280 A0A0A6YYK5 440 aaPredicted RBP23.26■■□□□ 1.31
CCDC38-201ENST00000344280 FOXN3O00409 490 aaPredicted RBP23.26■■□□□ 1.31
CCDC38-201ENST00000344280 KRT14P02533 472 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 P4HBP07237 508 aaKnown RBP23.26■■□□□ 1.31
CCDC38-201ENST00000344280 ITGA4P13612 1032 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 ERVK-9P63128 1117 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 TNNC1P63316 161 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 MAP3K10Q02779 954 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 PAK2Q13177 524 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 SLC9A9Q8IVB4 645 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 SLC35G2Q8TBE7 412 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 ZBED3Q96IU2 234 aaPredicted RBP23.26■■□□□ 1.31
CCDC38-201ENST00000344280 CAMKK2Q96RR4 588 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 INTUQ9ULD6 942 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 ZNRF3Q9ULT6 936 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 EGFRP00533 1210 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 CXCL9Q07325 125 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 NNTQ13423 1086 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 UGCGQ16739 394 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 PRPF38AQ8NAV1 312 aaKnown RBP23.26■■□□□ 1.31
CCDC38-201ENST00000344280 PIK3R5Q8WYR1 880 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 GPRC5CQ9NQ84 441 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 LCMT1Q9UIC8 334 aa23.26■■□□□ 1.31
CCDC38-201ENST00000344280 EMSYQ7Z589 1322 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 BUB1BO60566 1050 aaPredicted RBP23.25■■□□□ 1.31
CCDC38-201ENST00000344280 HSF2BPO75031 334 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 EIF2AK2P19525 551 aaKnown RBP23.25■■□□□ 1.31
CCDC38-201ENST00000344280 PPP3CAQ08209 521 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 ALS2CLQ60I27 953 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 SYTL5Q8TDW5 730 aaPredicted RBP23.25■■□□□ 1.31
CCDC38-201ENST00000344280 ARHGEF26Q96DR7 871 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 TAAR1Q96RJ0 339 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 DDX47Q9H0S4 455 aaKnown RBP23.25■■□□□ 1.31
CCDC38-201ENST00000344280 UBIAD1Q9Y5Z9 338 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 ATP8B3O60423 1300 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 RXRBP28702 533 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 RASA3Q14644 834 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 IQCKQ8N0W5 287 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 AGBL3Q8NEM8 1001 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.25■■□□□ 1.31
CCDC38-201ENST00000344280 SUCLA2Q9P2R7 463 aaPredicted RBP23.25■■□□□ 1.31
CCDC38-201ENST00000344280 PPP1R9AQ9ULJ8 1098 aa23.25■■□□□ 1.31
CCDC38-201ENST00000344280 PGRMC1O00264 195 aaKnown RBP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 LMNB1P20700 586 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 ECHS1P30084 290 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 MTMR1Q13613 665 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 DDX42Q86XP3 938 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 NEK9Q8TD19 979 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 PLEKHO2Q8TD55 490 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 HES6Q96HZ4 224 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 SEPT11Q9NVA2 429 aaKnown RBP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 LARSQ9P2J5 1176 aaKnown RBP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 ZNF233A6NK53 670 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 SART1O43290 800 aaKnown RBP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 ATP9AO75110 1047 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 GCLMP48507 274 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 DNAJC21Q5F1R6 531 aaKnown RBP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 C1orf220Q5T0J3 134 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 ARHGEF19Q8IW93 802 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 NIM1KQ8IY84 436 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 SLC20A1Q8WUM9 679 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 THAP2Q9H0W7 228 aa23.24■■□□□ 1.31
CCDC38-201ENST00000344280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC38-201ENST00000344280 GOLGA8KD6RF30 607 aa23.23■■□□□ 1.31
CCDC38-201ENST00000344280 QARSP47897 775 aaKnown RBP23.23■■□□□ 1.31
CCDC38-201ENST00000344280 RPS6P62753 249 aaKnown RBP23.23■■□□□ 1.31
CCDC38-201ENST00000344280 PCNX4Q63HM2 1172 aa23.23■■□□□ 1.31
CCDC38-201ENST00000344280 KCTD16Q68DU8 428 aa23.23■■□□□ 1.31
CCDC38-201ENST00000344280 SH2D3CQ8N5H7 860 aa23.23■■□□□ 1.31
CCDC38-201ENST00000344280 LMBR1Q8WVP7 490 aa23.23■■□□□ 1.31
CCDC38-201ENST00000344280 RUFY1Q96T51 708 aa23.23■■□□□ 1.31
CCDC38-201ENST00000344280 OPA1O60313 960 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 SHOX2O60902 331 aaPredicted RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 TMEM253P0C7T8 217 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 PLS3P13797 630 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 YWHABP31946 246 aaKnown RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 NPEPPSP55786 919 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 RASGEF1CQ8N431 466 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 RFFLQ8WZ73 363 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms