RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SYTL5Q8TDW5 730 aaPredicted RBP16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 CASKIN2Q8WXE0 1202 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 RUFY1Q96T51 708 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 GOLGA6AQ9NYA3 693 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 LARSQ9P2J5 1176 aaKnown RBP16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 NENFQ9UMX5 172 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 FZD1Q9UP38 647 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 CTDP1Q9Y5B0 961 aaPredicted RBP16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 PHF20L1A8MW92 1017 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 PPP1R37O75864 691 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 KRT13P13646 458 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 RARRES1P49788 294 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 TNNC1P63316 161 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 PLA2G4FQ68DD2 849 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 PHLDB3Q6NSJ2 640 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 NSMFQ6X4W1 530 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 TAS2R14Q9NYV8 317 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 EMSYQ7Z589 1322 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 IGSF9BQ9UPX0 1349 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 PSME4Q14997 1843 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 GCLMP48507 274 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 MTMR2Q13614 643 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 DNAJC21Q5F1R6 531 aaKnown RBP16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 FOXR1Q6PIV2 292 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 PALB2Q86YC2 1186 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 TEX2Q8IWB9 1127 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 GDF3Q9NR23 364 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 ASTN2O75129 1339 aaPredicted RBP16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 RPTORQ8N122 1335 aa16.18■□□□□ 0.18
VIPAS39-202ENST00000343765 MYH11P35749 1972 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 TESPA1A2RU30 521 aaPredicted RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 BACH1O14867 736 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 WDR46O15213 610 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 HSF2BPO75031 334 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 QARSP47897 775 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 PAK2Q13177 524 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 PPP2R5AQ15172 486 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 MCF2L2Q86YR7 1114 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 OLIG1Q8TAK6 271 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 FAM76AQ8TAV0 307 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 NEK9Q8TD19 979 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 NOC2LQ9Y3T9 749 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 FOXN3O00409 490 aaPredicted RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 SLC16A4O15374 487 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 ATP9AO75110 1047 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 YWHABP31946 246 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 NPEPPSP55786 919 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 PEX3P56589 373 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 CIAPIN1Q6FI81 312 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 MTMR14Q8NCE2 650 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 SLC35G2Q8TBE7 412 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 STRA6Q9BX79 667 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 UBE2TQ9NPD8 197 aaPredicted RBP16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
VIPAS39-202ENST00000343765 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 BCRP11274 1271 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 LMNB1P20700 586 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 TNFRSF8P28908 595 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 USP8P40818 1118 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 PPP3CAQ08209 521 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 HLTFQ14527 1009 aaKnown RBP eCLIP16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 PCNX4Q63HM2 1172 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 SLC30A5Q8TAD4 765 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 CAVIN3Q969G5 261 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ARHGEF26Q96DR7 871 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 WNK4Q96J92 1243 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 PBKQ96KB5 322 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ZIM3Q96PE6 472 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 KIFC3Q9BVG8 833 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 DDX47Q9H0S4 455 aaKnown RBP16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 PPP1R1BQ9UD71 204 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 UBIAD1Q9Y5Z9 338 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 PGRMC1O00264 195 aaKnown RBP16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ITGA4P13612 1032 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 TNFAIP3P21580 790 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ANXA13P27216 316 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 VAMP7P51809 220 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 FAM102BQ5T8I3 360 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ARHGEF19Q8IW93 802 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 CTNNBL1Q8WYA6 563 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ARL8AQ96BM9 186 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 ACCSQ96QU6 501 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 SLC38A10Q9HBR0 1119 aa16.16■□□□□ 0.18
VIPAS39-202ENST00000343765 KRIT1O00522 736 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 KRT14P02533 472 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 PLS3P13797 630 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 VCAM1P19320 739 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 PGM5Q15124 567 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 NAA35Q5VZE5 725 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 NT5DC3Q86UY8 548 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 ZBED3Q96IU2 234 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms