RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 FYNP06241 537 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 NR2F2P24468 414 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 KLC1Q07866 573 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 LRRC74AQ0VAA2 488 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 DENND6AQ8IWF6 608 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 SPDYAQ5MJ70 313 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 BEND6Q5SZJ8 279 aaPredicted RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 CTIFO43310 598 aaKnown RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 DPP8Q6V1X1 898 aaPredicted RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 KRT74Q7RTS7 529 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 PASD1Q8IV76 773 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 FAM161BQ96MY7 647 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 PLCH2O75038 1416 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 PDZK1P1A8MUH7 402 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 GTF2H3Q13889 308 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 SPATA2Q9UM82 520 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 ITPRIPL1Q6GPH6 555 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 SLC30A9Q6PML9 568 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 CITO14578 2027 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 ARMC3Q5W041 872 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 DPP9Q86TI2 863 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 ASIC4Q96FT7 647 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 TSEN34Q9BSV6 310 aaKnown RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 PRRG3Q9BZD7 231 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 ZNF644Q9H582 1327 aaPredicted RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 FAM47E-STBD1D6RA91 191 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 LRRN2O75325 713 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 SARS2Q9NP81 518 aaKnown RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 INPP5FQ9Y2H2 1132 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 POTEIP0CG38 1075 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 AKAP5P24588 427 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 HNMTP50135 292 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 RHOT2Q8IXI1 618 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 LARGE2Q8N3Y3 721 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 CCDC134Q9H6E4 229 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 KMT5AQ9NQR1 393 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 GINM1Q9NU53 330 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 VPS54Q9P1Q0 977 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 SYCP2Q9BX26 1530 aa18.69■□□□□ 0.58
SMAD4-201ENST00000342988 RNASE11Q8TAA1 199 aaKnown RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 RPF1Q9H9Y2 349 aaKnown RBP18.69■□□□□ 0.58
SMAD4-201ENST00000342988 STX7O15400 261 aaKnown RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 CCND2P30279 289 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 GPR1P46091 355 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 HSPA13P48723 471 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 ANXA11P50995 505 aaKnown RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 SF3B3Q15393 1217 aaKnown RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 SLC10A5Q5PT55 438 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 DPP10Q8N608 796 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 C7orf31Q8N865 590 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 MLPHQ9BV36 600 aaPredicted RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 CFAP69A5D8W1 941 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 FOXP2O15409 715 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 TRIM49P0CI25 452 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 TRIM49CP0CI26 452 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 ATP6V1C1P21283 382 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 DPY19L2Q6NUT2 758 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 BTN2A1Q7KYR7 527 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 OMA1Q96E52 524 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 TGS1Q96RS0 853 aaKnown RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 MRPL39Q9NYK5 338 aaKnown RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PIK3CDO00329 1044 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 CCT8P50990 548 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PARP9Q8IXQ6 854 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 EME1Q96AY2 570 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 JAG2Q9Y219 1238 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PRAMEP78395 509 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 POU5F1BQ06416 359 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 TMC5Q6UXY8 1006 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PLA2G4DQ86XP0 818 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 HEXIM2Q96MH2 286 aaKnown RBP18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PAGR1Q9BTK6 254 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 NDFIP2Q9NV92 336 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 C2orf54Q08AI8 447 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 COX10Q12887 443 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
SMAD4-201ENST00000342988 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 RCN1Q15293 331 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 SGSM1Q2NKQ1 1148 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 CCDC188H7C350 402 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 GOLGA8SH3BPF8 625 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 FOXO3O43524 673 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 BRAFP15056 766 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 HMOX2P30519 316 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 TGFBR2P37173 567 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 RAD51Q06609 339 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 PKN2Q16513 984 aaKnown RBP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 ABCC5O15440 1437 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 MED23Q9ULK4 1368 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 SNPHO15079 494 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 TRIM24O15164 1050 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 KCNA2P16389 499 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 RAD23BP54727 409 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 CLASP2O75122 1294 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms