RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 CEP55Q53EZ4 464 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 PALB2Q86YC2 1186 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 MS4A14Q96JA4 679 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 TSG101Q99816 390 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 TSPYL1Q9H0U9 437 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 FRMPD3Q5JV73 1810 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 CCDC188H7C350 402 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 ARP10275 920 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 GZMAP12544 262 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 SCP2P22307 547 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 CARSP49589 748 aaKnown RBP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 RASSF7Q02833 373 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 GUCY2DQ02846 1103 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 COG2Q14746 738 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 NOL9Q5SY16 702 aaKnown RBP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 XRRA1Q6P2D8 792 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 TMC3Q7Z5M5 1100 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 ARL8AQ96BM9 186 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 FAM204AQ9H8W3 233 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 NLRC5Q86WI3 1866 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 SHTN1A0MZ66 631 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 CCDC172P0C7W6 258 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 PTPN7P35236 360 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 MAGEA1P43355 309 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 SCNN1DP51172 638 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 MAP9Q49MG5 647 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 AGBL2Q5U5Z8 902 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 CDAN1Q8IWY9 1227 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 ACER1Q8TDN7 264 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 CCDC47Q96A33 483 aaKnown RBP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 TAF1DQ9H5J8 278 aaPredicted RBP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
CFAP54-201ENST00000342887 SMARCAL1Q9NZC9 954 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 APEX2Q9UBZ4 518 aa8.84□□□□□ -0.99
CFAP54-201ENST00000342887 A6NNZ2 444 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ADRB2P07550 413 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 MMP10P09238 476 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 RHOXF2BP0C7M4 288 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 TAL1P17542 331 aaPredicted RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 TNNI2P48788 182 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 RARRES1P49788 294 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 OAZ1P54368 228 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 PPFIA1Q13136 1202 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ZSCAN26Q16670 478 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 TUBB8Q3ZCM7 444 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 OGFOD1Q8N543 542 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 IL31RAQ8NI17 732 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 KREMEN1Q96MU8 473 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 PCDHB18PQ96TA0 734 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 RHOXF2Q9BQY4 288 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 AAASQ9NRG9 546 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 NR2E1Q9Y466 385 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.83□□□□□ -1
CFAP54-201ENST00000342887 CYP1A1P04798 512 aaPredicted RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 FERP16591 822 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ACO1P21399 889 aaKnown RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 STAT2P52630 851 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 POLR2FP61218 127 aaKnown RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 ZNF844Q08AG5 666 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 BFSP1Q12934 665 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 CXorf38Q8TB03 319 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 MORC4Q8TE76 937 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 RFFLQ8WZ73 363 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 SGSM3Q96HU1 749 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 UMODL1Q5DID0 1318 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ZSCAN5CA6NGD5 496 aaPredicted RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 ZBTB39O15060 712 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 EVI5O60447 810 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 USO1O60763 962 aaKnown RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 CCNE2O96020 404 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 EDNRBP24530 442 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ICAM3P32942 547 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 PPP3CAQ08209 521 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 DOK7Q18PE1 504 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 CFAP221Q4G0U5 840 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 MFSD5Q6N075 450 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 GSPT2Q8IYD1 628 aaKnown RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 TMEM161BQ8NDZ6 487 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 TMC2Q8TDI7 906 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 DHX38Q92620 1227 aaKnown RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 ARHGEF26Q96DR7 871 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ZNF317Q96PQ6 595 aaPredicted RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 WDR11Q9BZH6 1224 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 ZC3H12CQ9C0D7 883 aaKnown RBP8.83□□□□□ -1
CFAP54-201ENST00000342887 ERVK-5Q9HDB9 667 aa8.83□□□□□ -1
CFAP54-201ENST00000342887 MYO1FO00160 1098 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 KCNA2P16389 499 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 FLT3P36888 993 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 LACTB2Q53H82 288 aaPredicted RBP8.82□□□□□ -1
CFAP54-201ENST00000342887 FAM133AQ8N9E0 248 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 ALG3Q92685 438 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 DYDC2Q96IM9 177 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 HAPLN2Q9GZV7 340 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 MYPNQ86TC9 1320 aa8.82□□□□□ -1
CFAP54-201ENST00000342887 ZNF638Q14966 1978 aaKnown RBP8.82□□□□□ -1
CFAP54-201ENST00000342887 UNCXA6NJT0 531 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms