RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 IL9RQ01113 521 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 SLMAPQ14BN4 828 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ALG13Q9NP73 1137 aaKnown RBP13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 DCTN4Q9UJW0 460 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 TXNDC9O14530 226 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 DMP1Q13316 513 aaPredicted RBP13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 RCN2Q14257 317 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 MEA1Q16626 185 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 APBB1IPQ7Z5R6 666 aaPredicted RBP13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 AENQ8WTP8 325 aaKnown RBP13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 SCFD1Q8WVM8 642 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 CEP170P1Q96L14 293 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 THAP2Q9H0W7 228 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ALG6Q9Y672 507 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 CLDN3O15551 220 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 AKAP3O75969 853 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 MIIPQ5JXC2 388 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 SYCP2LQ5T4T6 812 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ARHGEF16Q5VV41 709 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 RHOT2Q8IXI1 618 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ZNF564Q8TBZ8 553 aaPredicted RBP13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 FBXO25Q8TCJ0 367 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 C11orf70Q9BRQ4 267 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ETNK1Q9HBU6 452 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 ABCB11O95342 1321 aa13.36□□□□□ -0.27
SNRNP48-201ENST00000342415 CAND2O75155 1236 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 OSTNP61366 133 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 ACCSQ96QU6 501 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 LRRD1A4D1F6 860 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 KCNA1Q09470 495 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 TAF11Q15544 211 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 CLUL1Q15846 466 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 TSNAXIP1Q2TAA8 658 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 RFX8Q6ZV50 586 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 ARMC9Q7Z3E5 817 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 TPCN2Q8NHX9 752 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 RAPGEF5Q92565 580 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 CXorf56Q9H5V9 222 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 SLITRK6Q9H5Y7 841 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 KMT5AQ9NQR1 393 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 FGFR1OP2Q9NVK5 253 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 PON1P27169 355 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 CRKP46108 304 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 IRX4P78413 519 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 KYNUQ16719 465 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 FRMD5Q7Z6J6 570 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 JAMLQ86YT9 394 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 SAYSD1Q9NPB0 183 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 PDHA1P08559 390 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 TROVE2P10155 538 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 YWHAGP61981 247 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 BBS9Q3SYG4 887 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 ARHGEF18Q6ZSZ5 1173 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 DEPTORQ8TB45 409 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 GRK7Q8WTQ7 553 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 C18orf8Q96DM3 657 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 XPO6Q96QU8 1125 aaKnown RBP13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 SALL4Q9UJQ4 1053 aa13.35□□□□□ -0.27
SNRNP48-201ENST00000342415 PDXKO00764 312 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 FMO5P49326 533 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 VAMP7P51809 220 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 NFIAQ12857 509 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 FIGNQ5HY92 759 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 LXNQ9BS40 222 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 ZNF233A6NK53 670 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 PODXLO00592 558 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 WDR11Q9BZH6 1224 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 A0A0G2JND7 137 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 ARHGAP42A6NI28 874 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 ZBTB39O15060 712 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 RASA3Q14644 834 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 SCARA5Q6ZMJ2 495 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 CFAP61Q8NHU2 1237 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
SNRNP48-201ENST00000342415 EPS8L3Q8TE67 593 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms