RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NT5DC3Q86UY8 548 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 BLIDQ8IZY5 108 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 ZSCAN10Q96SZ4 725 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-201ENST00000342245 STARD13Q9Y3M8 1113 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 FGGP02679 453 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 MAP7Q14244 749 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 LRRC14Q15048 493 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 PFKFB3Q16875 520 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-201ENST00000342245 PPP1R21Q6ZMI0 780 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 CEP128Q6ZU80 1094 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 UNC13DQ70J99 1090 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 CABLES1Q8TDN4 633 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 SCG3Q8WXD2 468 aaKnown RBP19.94■□□□□ 0.78
SMPD1-201ENST00000342245 COL4A3BPQ9Y5P4 624 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.94■□□□□ 0.78
SMPD1-201ENST00000342245 INHBCP55103 352 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 MAPK7Q13164 816 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 Q4G0T1 1027 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 METTL24Q5JXM2 366 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 ZC3H18Q86VM9 953 aaKnown RBP19.94■□□□□ 0.78
SMPD1-201ENST00000342245 JAMLQ86YT9 394 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 KIAA0825Q8IV33 1275 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 ANKLE1Q8NAG6 615 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 SUPT20HQ8NEM7 779 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 FBXO25Q8TCJ0 367 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 MGARPQ8TDB4 240 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 NLRP3Q96P20 1036 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 SEMA4AQ9H3S1 761 aa19.94■□□□□ 0.78
SMPD1-201ENST00000342245 DENND2DQ9H6A0 471 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-201ENST00000342245 hCG_1642624A0A1W2PR95 340 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 PALM3A6NDB9 673 aaPredicted RBP19.93■□□□□ 0.78
SMPD1-201ENST00000342245 PTPN4P29074 926 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 AP1B1Q10567 949 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 VPS36Q86VN1 386 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 GPIHBP1Q8IV16 184 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 NELFCDQ8IXH7 590 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 PITPNM3Q9BZ71 974 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 LNPEPQ9UIQ6 1025 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 FLT1P17948 1338 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 PP2D1A8MPX8 630 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 H0Y3Z8 333 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 SLC34A1Q06495 639 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 VSTM1Q6UX27 236 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 RNF168Q8IYW5 571 aaPredicted RBP19.93■□□□□ 0.78
SMPD1-201ENST00000342245 WDR66Q8TBY9 1149 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 ERP27Q96DN0 273 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 DDX43Q9NXZ2 648 aaKnown RBP19.93■□□□□ 0.78
SMPD1-201ENST00000342245 NKIRAS1Q9NYS0 192 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 DBR1Q9UK59 544 aaKnown RBP19.93■□□□□ 0.78
SMPD1-201ENST00000342245 RIC1Q4ADV7 1423 aa19.93■□□□□ 0.78
SMPD1-201ENST00000342245 MAP3K7O43318 606 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 RPL13P26373 211 aaKnown RBP19.92■□□□□ 0.78
SMPD1-201ENST00000342245 TROAPQ12815 778 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 IFIT5Q13325 482 aaKnown RBP19.92■□□□□ 0.78
SMPD1-201ENST00000342245 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
SMPD1-201ENST00000342245 ENAHQ8N8S7 591 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-201ENST00000342245 FAM133AQ8N9E0 248 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 ARMT1Q9H993 441 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 NAGPAQ9UK23 515 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 DLEC1Q9Y238 1755 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 SLCO1A2P46721 670 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 FKBP3Q00688 224 aaKnown RBP19.92■□□□□ 0.78
SMPD1-201ENST00000342245 HLFQ16534 295 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 CGB2Q6NT52 195 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 LRRC74BQ6ZQY2 392 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 SLC7A6OSQ96CW6 309 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-201ENST00000342245 HIC2Q96JB3 615 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 CEP63Q96MT8 703 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 PLIN2Q99541 437 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 TUBB6Q9BUF5 446 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 SPZ1Q9BXG8 430 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 TMEM165Q9HC07 324 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 SAR1AQ9NR31 198 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 ZNF212Q9UDV6 495 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 HAO1Q9UJM8 370 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 PCDHA4Q9UN74 947 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 MEGF6O75095 1541 aa19.92■□□□□ 0.78
SMPD1-201ENST00000342245 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 CCDC88AQ3V6T2 1871 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 CCDC194A0A1B0GVG4 234 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 PFDN1O60925 122 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 H2AFZP0C0S5 128 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 PCP11498 1178 aaKnown RBP19.91■□□□□ 0.78
SMPD1-201ENST00000342245 CHRNA3P32297 505 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 ALKBH5Q6P6C2 394 aaKnown RBP19.91■□□□□ 0.78
SMPD1-201ENST00000342245 H2AFVQ71UI9 128 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 SV2BQ7L1I2 683 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 TTC8Q8TAM2 541 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 PLA2G12BQ9BX93 195 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 LRRC27Q9C0I9 530 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 KCNK9Q9NPC2 374 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 GRHL1Q9NZI5 618 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 SNX24Q9Y343 169 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 DOCK2Q92608 1830 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 TARSP26639 723 aaKnown RBP19.91■□□□□ 0.78
SMPD1-201ENST00000342245 IL9RQ01113 521 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 DAB2IPQ5VWQ8 1189 aa19.91■□□□□ 0.78
SMPD1-201ENST00000342245 GALNT17Q6IS24 598 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms