RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CEP55Q53EZ4 464 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 FBXW10Q5XX13 1052 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 STYK1Q6J9G0 422 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 LRIG3Q6UXM1 1119 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 RFFLQ8WZ73 363 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 PRMT6Q96LA8 375 aaPredicted RBP13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 ATP6V1G3Q96LB4 118 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 INTS2Q9H0H0 1204 aaKnown RBP13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.275e-8■■■■□ 20.8
UBE2L3-201ENST00000342192 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 EBAG9O00559 213 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 NEBLO76041 1014 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 ATP1A2P50993 1020 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CYP2J2P51589 502 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 UBXN2AP68543 259 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 AOC3Q16853 763 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 NAIF1Q69YI7 327 aaPredicted RBP13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 EFCAB13Q8IY85 973 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 CEP120Q8N960 986 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
UBE2L3-201ENST00000342192 TRIM49P0CI25 452 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 TRIM49CP0CI26 452 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 ITGA4P13612 1032 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 NR1D1P20393 614 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 MYL7Q01449 175 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 ODR4Q5SWX8 454 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 OSGEPQ9NPF4 335 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 APEX2Q9UBZ4 518 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 AMFRQ9UKV5 643 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 GOLGB1Q14789 3259 aaKnown RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 BUB1BO60566 1050 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 HSD17B3P37058 310 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 B3GNT9Q6UX72 402 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 MAATS1Q7Z4T9 603 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 HOMEZQ8IX15 550 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 KAT2BQ92831 832 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 NEUROG2Q9H2A3 272 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 RABEP2Q9H5N1 569 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 TTC7AQ9ULT0 858 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 IGSF9BQ9UPX0 1349 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 ZEB2O60315 1214 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 SLC35G2Q8TBE7 412 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 LXNQ9BS40 222 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 TEKT3Q9BXF9 490 aa13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 MRPL11Q9Y3B7 192 aaKnown RBP13.37□□□□□ -0.27
UBE2L3-201ENST00000342192 H0YIN7 160 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 PPP1R37O75864 691 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 ARP10275 920 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 PPATQ06203 517 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 BFSP1Q12934 665 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 NBPF20Q3BBV1 942 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 TADA2BQ86TJ2 420 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 TMBIM4Q9HC24 238 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 MYH11P35749 1972 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 H0YGN5 161 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 PPP1R12AO14974 1030 aaPredicted RBP13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 RFX1P22670 979 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 MAPK7Q13164 816 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 CCDC26Q8TAB7 109 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 ZBTB21Q9ULJ3 1066 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 NFS1Q9Y697 457 aa13.36□□□□□ -0.27
UBE2L3-201ENST00000342192 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
UBE2L3-201ENST00000342192 GOLGA6L10A6NI86 522 aa13.35□□□□□ -0.27
UBE2L3-201ENST00000342192 HIP1RO75146 1068 aa13.35□□□□□ -0.27
UBE2L3-201ENST00000342192 LSP1P33241 339 aa13.35□□□□□ -0.27
UBE2L3-201ENST00000342192 ITGB3BPQ13352 177 aaPredicted RBP13.35□□□□□ -0.27
UBE2L3-201ENST00000342192 MYBPC2Q14324 1141 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms