RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 TRIM45Q9H8W5 580 aaPredicted RBP8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 SLC38A7Q9NVC3 462 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 THEGQ9P2T0 379 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 SLC9A2Q9UBY0 812 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 TMEM247A6NEH6 219 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 RRN3P2A6NIE6 340 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PDXKO00764 312 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 CLIC2O15247 247 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PSMD3O43242 534 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 MGEA5O60502 916 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 KRT38O76015 456 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 ZRANB2O95218 330 aaKnown RBP eCLIP8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 RALAP11233 206 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PMLP29590 882 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 GPC5P78333 572 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 GUCY2DQ02846 1103 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 DUOXA2Q1HG44 320 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 KAZNQ674X7 775 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PI16Q6UXB8 463 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 TBC1D16Q8TBP0 767 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 LRGUKQ96M69 825 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 FTOQ9C0B1 505 aaKnown RBP eCLIP8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PCDHB8Q9UN66 801 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 KIF28PB7ZC32 967 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 TMCC1O94876 653 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 MOCS3O95396 460 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 CSF1RP07333 972 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 ERCC3P19447 782 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PSMA2P25787 234 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 ARL4CP56559 192 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 C6orf118Q5T5N4 469 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 NXNQ6DKJ4 435 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 C4orf50Q6ZRC1 276 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 FRMD5Q7Z6J6 570 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 CAPS2Q9BXY5 557 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 RAVER2Q9HCJ3 691 aaKnown RBP8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 PSD3Q9NYI0 1048 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 ITSN1Q15811 1721 aa8.25□□□□□ -1.09
ATP2B4-201ENST00000341360 KBTBD13C9JR72 458 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 EIF4A3P38919 411 aaKnown RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 VPS41P49754 854 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 RSBN1LQ6PCB5 846 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 CDKL3Q8IVW4 592 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ZNF280CQ8ND82 737 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 UIMC1Q96RL1 719 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 RIT2Q99578 217 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 DESI2Q9BSY9 194 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 LY9Q9HBG7 655 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 IP6K2Q9UHH9 426 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 GSG1L2A8MUP6 293 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SMAPO00193 183 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 LRRN2O75325 713 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 GH1P01241 217 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 CTTNQ14247 550 aaKnown RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SNX17Q15036 470 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 HSP90AA5PQ58FG0 334 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 CC2D1AQ6P1N0 951 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 GPD1LQ8N335 351 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 GBP7Q8N8V2 638 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 FAM133AQ8N9E0 248 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SEPT1Q8WYJ6 367 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SERPINI1Q99574 410 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ZBTB18Q99592 522 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 PCIF1Q9H4Z3 704 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 NHEJ1Q9H9Q4 299 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 C17orf75Q9HAS0 396 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 UBN1Q9NPG3 1134 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 DIP2CQ9Y2E4 1556 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 PLEKHA8P1O95397 391 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 STMN1P16949 149 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 HOXA13P31271 388 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 GUCY2FP51841 1108 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 RBL2Q08999 1139 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 CCDC15Q0P6D6 951 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ANKRD20A4Q4UJ75 823 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ANKRD20A8PQ5CZ79 823 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ANKRD20A2Q5SQ80 823 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ANKRD20A1Q5TYW2 823 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 IER5Q5VY09 327 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 LDHDQ86WU2 507 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 THNSL1Q8IYQ7 743 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SLC35F6Q8N357 371 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 RAET1EQ8TD07 263 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SPATA33Q96N06 139 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 VCPKMTQ9H867 229 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 DNAJC12Q9UKB3 198 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 ORC6Q9Y5N6 252 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SPATA31A5Q5VU36 1347 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 SPATA31A7Q8IWB4 1347 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 KPNA7A9QM74 516 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 H3BRJ5 948 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 MEIS1O00470 390 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 CTNND1O60716 968 aaKnown RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 MFAP3LO75121 409 aa8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
ATP2B4-201ENST00000341360 CD4P01730 458 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms