RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MSL3Q8N5Y2 521 aaKnown RBP16.45■□□□□ 0.22
BRAT1-201ENST00000340611 LXNQ9BS40 222 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 RUSC1Q9BVN2 902 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 STK17AQ9UEE5 414 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 HPCAL4Q9UM19 191 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 FKBP1BP68106 108 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 RASAL3Q86YV0 1011 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 FGD4Q96M96 766 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 MMP19Q99542 508 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 C7orf25Q9BPX7 421 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
BRAT1-201ENST00000340611 REXO2Q9Y3B8 237 aaKnown RBP16.45■□□□□ 0.22
BRAT1-201ENST00000340611 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
BRAT1-201ENST00000340611 PDCLQ13371 301 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 KCNB1Q14721 858 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 FKBP15Q5T1M5 1219 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 KIAA0895Q8NCT3 520 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
BRAT1-201ENST00000340611 RPS6KL1Q9Y6S9 549 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 ATP1A1P05023 1023 aaKnown RBP16.44■□□□□ 0.22
BRAT1-201ENST00000340611 CYP11B2P19099 503 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 SLC12A3P55017 1021 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-201ENST00000340611 WDR93Q6P2C0 686 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 SPDYE1Q8NFV5 336 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-201ENST00000340611 DNAJC19Q96DA6 116 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
BRAT1-201ENST00000340611 KDM3AQ9Y4C1 1321 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
BRAT1-201ENST00000340611 EZRP15311 586 aaKnown RBP16.43■□□□□ 0.22
BRAT1-201ENST00000340611 HYIQ5T013 277 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 B3GNT9Q6UX72 402 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 INPP4AQ96PE3 977 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-201ENST00000340611 PNMA2Q9UL42 364 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 ANKRD33BA6NCL7 494 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 TTC36A6NLP5 189 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 EIF3HO15372 352 aaKnown RBP eCLIP16.43■□□□□ 0.22
BRAT1-201ENST00000340611 ATP1A2P50993 1020 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
BRAT1-201ENST00000340611 TUBB4BP68371 445 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 KCTD2Q14681 263 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 CYFIP1Q7L576 1253 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 FAM133AQ8N9E0 248 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 NELFBQ8WX92 580 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 CUEDC2Q9H467 287 aa16.43■□□□□ 0.22
BRAT1-201ENST00000340611 EPN1Q9Y6I3 576 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-201ENST00000340611 MEFVO15553 781 aaPredicted RBP16.42■□□□□ 0.22
BRAT1-201ENST00000340611 ATP2C2O75185 946 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 BCRP11274 1271 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 THEMIS2Q5TEJ8 643 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 TBC1D31Q96DN5 1066 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 NDUFA10O95299 355 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 KCNA2P16389 499 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 STXBP2Q15833 593 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 LY6KQ17RY6 165 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 GJC2Q5T442 439 aaPredicted RBP16.42■□□□□ 0.22
BRAT1-201ENST00000340611 WLSQ5T9L3 541 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 NLRX1Q86UT6 975 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
BRAT1-201ENST00000340611 RIT2Q99578 217 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 IKZF4Q9H2S9 585 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 SLC40A1Q9NP59 571 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 FBXO40Q9UH90 709 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 NKRFO15226 690 aaKnown RBP eCLIP16.42■□□□□ 0.22
BRAT1-201ENST00000340611 SHOX2O60902 331 aaPredicted RBP16.42■□□□□ 0.22
BRAT1-201ENST00000340611 RHOBTB3O94955 611 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 FECHP22830 423 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 AMPD3Q01432 767 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 UBXN1Q04323 297 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 TRAPPC11Q7Z392 1133 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 REEP2Q9BRK0 252 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
BRAT1-201ENST00000340611 PFASO15067 1338 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 COASYQ13057 564 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 RBBP5Q15291 538 aaKnown RBP16.41■□□□□ 0.22
BRAT1-201ENST00000340611 SNCBQ16143 134 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 RGMBQ6NW40 437 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 PANK4Q9NVE7 773 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 TCEAL9Q9UHQ7 104 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 ZNF185O15231 689 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 FSBPO95073 299 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 ARIH2O95376 493 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 ZBTB48P10074 688 aaPredicted RBP16.41■□□□□ 0.22
BRAT1-201ENST00000340611 MYBL1P10243 752 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 NPEPPSP55786 919 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 RWDD2BP57060 319 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 MRPS25P82663 173 aaKnown RBP16.41■□□□□ 0.22
BRAT1-201ENST00000340611 IFT88Q13099 833 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 PPFIA1Q13136 1202 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms