RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 SMTNP53814 917 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 KCNMA1Q12791 1236 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 GRM1Q13255 1194 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 E4F1Q66K89 784 aaPredicted RBP23.25■■□□□ 1.31
VRK2-201ENST00000340157 TAS1R3Q7RTX0 852 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 CNGA4Q8IV77 575 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 MSL3Q8N5Y2 521 aaKnown RBP23.25■■□□□ 1.31
VRK2-201ENST00000340157 GOLGA5Q8TBA6 731 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 TMEM174Q8WUU8 243 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 SLC7A3Q8WY07 619 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 ARHGAP28Q9P2N2 729 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 GLRA2P23416 452 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 DRP2Q13474 957 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 MAP4K3Q8IVH8 894 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 PPTC7Q8NI37 304 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 AFG1LQ8WV93 481 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 CBWD1Q9BRT8 395 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 SMARCAD1Q9H4L7 1026 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 ABHD10Q9NUJ1 306 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 AGPAT5Q9NUQ2 364 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 GJD2Q9UKL4 321 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 FAM184BQ9ULE4 1060 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 CAPN11Q9UMQ6 739 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 STX10O60499 249 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 MAFO75444 373 aaPredicted RBP23.24■■□□□ 1.31
VRK2-201ENST00000340157 EPB41P11171 864 aaKnown RBP23.24■■□□□ 1.31
VRK2-201ENST00000340157 KCNJ6P48051 423 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 KCNH2Q12809 1159 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 CCL14Q16627 93 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 DUSP28Q4G0W2 176 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 C12orf56Q8IXR9 622 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 HVCN1Q96D96 273 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 MKNK1Q9BUB5 465 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 SLC5A4Q9NY91 659 aa23.24■■□□□ 1.31
VRK2-201ENST00000340157 ZHX1Q9UKY1 873 aaPredicted RBP23.24■■□□□ 1.31
VRK2-201ENST00000340157 EVPLQ92817 2033 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 TOMM70O94826 608 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 LGALS2P05162 132 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 KRT9P35527 623 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 FIGNQ5HY92 759 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 FAM186BQ8IYM0 893 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 ZSWIM2Q8NEG5 633 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 SLC35C1Q96A29 364 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 CCDC51Q96ER9 411 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 METTL14Q9HCE5 456 aaKnown RBP23.23■■□□□ 1.31
VRK2-201ENST00000340157 KCND1Q9NSA2 647 aa23.23■■□□□ 1.31
VRK2-201ENST00000340157 CA12O43570 354 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 IGHA2P01877 340 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 TPM1P09493 284 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 TRIM21P19474 475 aaKnown RBP23.22■■□□□ 1.31
VRK2-201ENST00000340157 PSMC2P35998 433 aaKnown RBP23.22■■□□□ 1.31
VRK2-201ENST00000340157 SLC26A2P50443 739 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 MYBPC2Q14324 1141 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 RETREG2Q8NC44 543 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 IFT74Q96LB3 600 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 NUP58Q9BVL2 599 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 RNPEPQ9H4A4 650 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 ANKRD63C9JTQ0 380 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 ARHGAP6O43182 974 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 ADSSP30520 456 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 MKRN4PQ13434 485 aaPredicted RBP23.22■■□□□ 1.31
VRK2-201ENST00000340157 SLC39A4Q6P5W5 647 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 CCAR2Q8N163 923 aaKnown RBP23.22■■□□□ 1.31
VRK2-201ENST00000340157 TRAPPC12Q8WVT3 735 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 DNAJC7Q99615 494 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 PCIF1Q9H4Z3 704 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 FAM207AQ9NSI2 230 aaPredicted RBP23.22■■□□□ 1.31
VRK2-201ENST00000340157 PPME1Q9Y570 386 aa23.22■■□□□ 1.31
VRK2-201ENST00000340157 CENPFP49454 3210 aa23.21■■□□□ 1.31
VRK2-201ENST00000340157 IGKV6-21A0A0C4DH24 114 aa23.21■■□□□ 1.31
VRK2-201ENST00000340157 NRDCO43847 1150 aa23.21■■□□□ 1.31
VRK2-201ENST00000340157 XRCC5P13010 732 aaKnown RBP23.21■■□□□ 1.31
VRK2-201ENST00000340157 IQSEC1Q6DN90 963 aa23.21■■□□□ 1.31
VRK2-201ENST00000340157 PAXIP1Q6ZW49 1069 aaPredicted RBP23.21■■□□□ 1.31
VRK2-201ENST00000340157 KCNN1Q92952 543 aa23.21■■□□□ 1.31
VRK2-201ENST00000340157 PCMTD1Q96MG8 357 aaPredicted RBP23.21■■□□□ 1.31
VRK2-201ENST00000340157 CGNQ9P2M7 1197 aaKnown RBP23.21■■□□□ 1.31
VRK2-201ENST00000340157 SOWAHDA6NJG2 315 aa23.2■■□□□ 1.3
VRK2-201ENST00000340157 CYP2B6P20813 491 aa23.2■■□□□ 1.3
VRK2-201ENST00000340157 MTF1Q14872 753 aa23.2■■□□□ 1.3
VRK2-201ENST00000340157 DCAF17Q5H9S7 520 aaPredicted RBP23.2■■□□□ 1.3
VRK2-201ENST00000340157 C16orf70Q9BSU1 422 aa23.2■■□□□ 1.3
VRK2-201ENST00000340157 CRACR2AQ9BSW2 395 aa23.2■■□□□ 1.3
VRK2-201ENST00000340157 ERAP1Q9NZ08 941 aa23.2■■□□□ 1.3
VRK2-201ENST00000340157 LUC7L2Q9Y383 392 aaKnown RBP23.2■■□□□ 1.3
VRK2-201ENST00000340157 A0A1W2PQJ5 194 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 EXOC3O60645 756 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 AFPP02771 609 aaKnown RBP23.19■■□□□ 1.3
VRK2-201ENST00000340157 ZNF286BP0CG31 522 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 ZNF865P0CJ78 1059 aaPredicted RBP23.19■■□□□ 1.3
VRK2-201ENST00000340157 HOXD8P13378 290 aaPredicted RBP23.19■■□□□ 1.3
VRK2-201ENST00000340157 NAMPTP43490 491 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 SNRPFP62306 86 aaKnown RBP23.19■■□□□ 1.3
VRK2-201ENST00000340157 RAD9BQ6WBX8 426 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 MMRN2Q9H8L6 949 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 TRMT1Q9NXH9 659 aaKnown RBP23.19■■□□□ 1.3
VRK2-201ENST00000340157 HSPBP1Q9NZL4 362 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 EXOC7Q9UPT5 735 aa23.19■■□□□ 1.3
VRK2-201ENST00000340157 TRPC6Q9Y210 931 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms