RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 AP5M1Q9H0R1 490 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 TSPAN9O75954 239 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 NDUFA10O95299 355 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 NFKBIAP25963 317 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 ARL4CP56559 192 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 KLHL24Q6TFL4 600 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 TARSL2A2RTX5 802 aaKnown RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 TAF5LO75529 589 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 FLT3P36888 993 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 ARL4DP49703 201 aa13.63□□□□□ -0.23
USP47-202ENST00000339865 HEXIM2Q96MH2 286 aaKnown RBP13.63□□□□□ -0.23
USP47-202ENST00000339865 UBA6A0AVT1 1052 aaPredicted RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 MEIS1O00470 390 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 EIF4A3P38919 411 aaKnown RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 DPYDQ12882 1025 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 RNF219Q5W0B1 726 aaPredicted RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 FAM81BQ96LP2 452 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 PRMT1Q99873 361 aaKnown RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 BATF3Q9NR55 127 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 NDFIP2Q9NV92 336 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 SCN3BQ9NY72 215 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 HPCAL4Q9UM19 191 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 HNRNPRO43390 633 aaKnown RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 MYBL1P10243 752 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 SCARA5Q6ZMJ2 495 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.23
USP47-202ENST00000339865 ZBTB10Q96DT7 871 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 HSPBP1Q9NZL4 362 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 CMA1P23946 247 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 RIN3Q8TB24 985 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 RGL1Q9NZL6 768 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 GOLGA8JA6NMD2 632 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 KCNA2P16389 499 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 ARF5P84085 180 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 LRRC49Q8IUZ0 686 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 TRIM63Q969Q1 353 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 SH3KBP1Q96B97 665 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 BRAFP15056 766 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 TCN1P20061 433 aaPredicted RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 OSTNP61366 133 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 NPHS2Q9NP85 383 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 POTEFA5A3E0 1075 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 SRGAP2O75044 1071 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 UBTFL6P0CB48 400 aaPredicted RBP13.62□□□□□ -0.23
USP47-202ENST00000339865 SARM1Q6SZW1 724 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 DLGAP2Q9P1A6 1054 aa13.62□□□□□ -0.23
USP47-202ENST00000339865 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 OR6B2Q6IFH4 312 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 PKN3Q6P5Z2 889 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 NLRP14Q86W24 1093 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 SIX5Q8N196 739 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 C19orf18Q8NEA5 215 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
USP47-202ENST00000339865 PIPSLA2A3N6 862 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 SPDYE5A6NIY4 337 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 SGSM2O43147 1006 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 CDC27P30260 824 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 PABPC4Q13310 644 aaKnown RBP eCLIP13.61□□□□□ -0.234e-15■□□□□ 10.3
USP47-202ENST00000339865 SPDYE7PQ495Y7 208 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
USP47-202ENST00000339865 SMARCAD1Q9H4L7 1026 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 PCDHA7Q9UN72 937 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 A0A087WWV3 80 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 RSPH10B2B2RC85 870 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
USP47-202ENST00000339865 ZBTB22O15209 634 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 RSPH10BP0C881 870 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 POLR2MP0CAP2 368 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 PRKCQQ04759 706 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 SYNGAP1Q96PV0 1343 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 NDUFB5O43674 189 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 NDUFA5Q16718 116 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 HIC2Q96JB3 615 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
USP47-202ENST00000339865 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 ANAPC7Q9UJX3 599 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 TCHHQ07283 1943 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 PPIP5K2O43314 1243 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 EIF2B2P49770 351 aaKnown RBP13.61□□□□□ -0.23
USP47-202ENST00000339865 MRPS35P82673 323 aaKnown RBP13.61□□□□□ -0.23
USP47-202ENST00000339865 MAN2A1Q16706 1144 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 STX12Q86Y82 276 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
USP47-202ENST00000339865 V9GYQ6 96 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms