RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 HP1BP3Q5SSJ5 553 aaPredicted RBP13.39□□□□□ -0.27
RIOK3-201ENST00000339486 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 FBXO33Q7Z6M2 555 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 BBOF1Q8ND07 529 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 CFAP61Q8NHU2 1237 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PNMA5Q96PV4 448 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 LRRC37BQ96QE4 947 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 INTS2Q9H0H0 1204 aaKnown RBP13.39□□□□□ -0.27
RIOK3-201ENST00000339486 BATF3Q9NR55 127 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 NTSR2O95665 410 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PAX7P23759 505 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 MSH2P43246 934 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PREPLQ4J6C6 727 aaPredicted RBP13.39□□□□□ -0.27
RIOK3-201ENST00000339486 EPM2AIP1Q7L775 607 aaPredicted RBP13.39□□□□□ -0.27
RIOK3-201ENST00000339486 CD302Q8IX05 232 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 REEP2Q9BRK0 252 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 GOLGA8IPA6NC78 632 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 GOLGA8JA6NMD2 632 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 UBOX5O94941 541 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PON1P27169 355 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 MAN1A1P33908 653 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 MFAP3P55082 362 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 MIER3Q7Z3K6 550 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 KCNK18Q7Z418 384 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 CTAGE3PQ8IX95 158 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 PALM2Q8IXS6 379 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 MREGQ8N565 214 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
RIOK3-201ENST00000339486 INPP4AQ96PE3 977 aaPredicted RBP13.39□□□□□ -0.27
RIOK3-201ENST00000339486 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 TTYH3Q9C0H2 523 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 EXOC7Q9UPT5 735 aa13.39□□□□□ -0.27
RIOK3-201ENST00000339486 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 TXNDC9O14530 226 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 CAMTA2O94983 1202 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 AKR1B1P15121 316 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 TNNI1P19237 187 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
RIOK3-201ENST00000339486 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 ARHGAP27Q6ZUM4 889 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
RIOK3-201ENST00000339486 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 ANAPC7Q9UJX3 599 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 PHF2O75151 1096 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 SPAG7O75391 227 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
RIOK3-201ENST00000339486 BIRC2Q13490 618 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 DPH6Q7L8W6 267 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 RILPQ96NA2 401 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 PURBQ96QR8 312 aaKnown RBP13.38□□□□□ -0.27
RIOK3-201ENST00000339486 NUDCD1Q96RS6 583 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 CARD9Q9H257 536 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 CYP11B2P19099 503 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 CASP4P49662 377 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 MAPK7Q13164 816 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 KYNUQ16719 465 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 QPCTQ16769 361 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 CCDC89Q8N998 374 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 ZNF564Q8TBZ8 553 aaPredicted RBP13.38□□□□□ -0.27
RIOK3-201ENST00000339486 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 C18orf8Q96DM3 657 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 OSBPL1AQ9BXW6 950 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 STK33Q9BYT3 514 aa13.38□□□□□ -0.27
RIOK3-201ENST00000339486 CNOT8Q9UFF9 292 aaKnown RBP13.38□□□□□ -0.27
RIOK3-201ENST00000339486 ATP2B4P23634 1241 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 IFI35P80217 286 aaPredicted RBP13.37□□□□□ -0.27
RIOK3-201ENST00000339486 SPARCL1Q14515 664 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
RIOK3-201ENST00000339486 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
RIOK3-201ENST00000339486 NUP85Q9BW27 656 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 MST1RQ04912 1400 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 NQO1P15559 274 aaKnown RBP13.37□□□□□ -0.27
RIOK3-201ENST00000339486 CCND1P24385 295 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 FAM102BQ5T8I3 360 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
RIOK3-201ENST00000339486 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 TATDN2Q93075 761 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 NACC1Q96RE7 527 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 SAYSD1Q9NPB0 183 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 RAB20Q9NX57 234 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 SCOCQ9UIL1 159 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
RIOK3-201ENST00000339486 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms