RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PPIL2Q13356 520 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 PPP2R5CQ13362 524 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 ALKBH5Q6P6C2 394 aaKnown RBP17.78■□□□□ 0.44
LITAF-201ENST00000339430 LEKR1Q6ZMV7 388 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 SLC10A4Q96EP9 437 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 KRT12Q99456 494 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 RLFQ13129 1914 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 A0A0G2JLL6 359 aaPredicted RBP17.77■□□□□ 0.44
LITAF-201ENST00000339430 GFPT2O94808 682 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 GLI1P08151 1106 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 CYP2J2P51589 502 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 PLS1Q14651 629 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 CEP55Q53EZ4 464 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 PRRT2Q7Z6L0 340 aaPredicted RBP17.77■□□□□ 0.44
LITAF-201ENST00000339430 TSEN2Q8NCE0 465 aaKnown RBP17.77■□□□□ 0.44
LITAF-201ENST00000339430 BANK1Q8NDB2 785 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 GOLGA5Q8TBA6 731 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 CXCL11O14625 94 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 KCNK3O14649 394 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 CELF2O95319 508 aaKnown RBP17.77■□□□□ 0.44
LITAF-201ENST00000339430 MAEAQ7L5Y9 396 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 KCNH4Q9UQ05 1017 aa17.77■□□□□ 0.44
LITAF-201ENST00000339430 HEXIM1O94992 359 aaKnown RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 FDX1P10109 184 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 CARSP49589 748 aaKnown RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 EPHB4P54760 987 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 FAM178BQ8IXR5 827 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 IFT81Q8WYA0 676 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 BORCS6Q96GS4 357 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 GBA2Q9HCG7 927 aaPredicted RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 EPB41L5Q9HCM4 733 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 HOXC10Q9NYD6 342 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 ADAMTS5Q9UNA0 930 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 BZW2Q9Y6E2 419 aaKnown RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 NFIBO00712 420 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 EIF3DO15371 548 aaKnown RBP eCLIP17.76■□□□□ 0.43
LITAF-201ENST00000339430 PSMC2P35998 433 aaKnown RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 JAM2P57087 298 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 GUCY2DQ02846 1103 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 PROCA1Q8NCQ7 364 aaPredicted RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 INPP4AQ96PE3 977 aaPredicted RBP17.76■□□□□ 0.43
LITAF-201ENST00000339430 FIZ1Q96SL8 496 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 RNF14Q9UBS8 474 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 NFU1Q9UMS0 254 aa17.76■□□□□ 0.43
LITAF-201ENST00000339430 SPDYE16A6NNV3 312 aaPredicted RBP17.75■□□□□ 0.43
LITAF-201ENST00000339430 TRIM49P0CI25 452 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 TRIM49CP0CI26 452 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 GJA5P36382 358 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 RPS6KA1Q15418 735 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 KCTD19Q17RG1 926 aaPredicted RBP17.75■□□□□ 0.43
LITAF-201ENST00000339430 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 ODR4Q5SWX8 454 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 KLHL7Q8IXQ5 586 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 RDH13Q8NBN7 331 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 REPS2Q8NFH8 660 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 CLEC4DQ8WXI8 215 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 RUBCNQ92622 972 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 TAF4BQ92750 862 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 LXNQ9BS40 222 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 PRKCIP41743 596 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 FOXR1Q6PIV2 292 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 ZNF720Q7Z2F6 126 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
LITAF-201ENST00000339430 NACC1Q96RE7 527 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 RIPK3Q9Y572 518 aa17.75■□□□□ 0.43
LITAF-201ENST00000339430 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
LITAF-201ENST00000339430 TMCO5BA8MYB1 307 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 IPO5O00410 1097 aaKnown RBP17.74■□□□□ 0.43
LITAF-201ENST00000339430 FKBP1BP68106 108 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 TMEM132BQ14DG7 1078 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 TRADDQ15628 312 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 CBWD6Q4V339 395 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 CBWD3Q5JTY5 395 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 CBWD5Q5RIA9 395 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 SNRNP48Q6IEG0 339 aaKnown RBP17.74■□□□□ 0.43
LITAF-201ENST00000339430 C2orf69Q8N8R5 385 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 TEKT3Q9BXF9 490 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 DDX3XO00571 662 aaKnown RBP eCLIP17.74■□□□□ 0.436e-10■■■■□ 22.1
LITAF-201ENST00000339430 EVI5O60447 810 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 KIF4AO95239 1232 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 ITGBL1O95965 494 aaPredicted RBP17.74■□□□□ 0.43
LITAF-201ENST00000339430 FAM153BP0C7A2 387 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 FMO5P49326 533 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 FAM153CQ494X1 144 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 GLE1Q53GS7 698 aaKnown RBP17.74■□□□□ 0.43
LITAF-201ENST00000339430 EMBQ6PCB8 327 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 IFT20Q8IY31 132 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 AGPAT3Q9NRZ7 376 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 FAM153AQ9UHL3 310 aa17.74■□□□□ 0.43
LITAF-201ENST00000339430 ZNF214Q9UL59 606 aaPredicted RBP17.74■□□□□ 0.43
LITAF-201ENST00000339430 LOC285556D6RIA3 1793 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 GOLGA6CA6NDK9 693 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 GOLGA6DP0CG33 693 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 HS2ST1Q7LGA3 356 aa17.73■□□□□ 0.43
LITAF-201ENST00000339430 TRMT1LQ7Z2T5 733 aaKnown RBP17.73■□□□□ 0.43
LITAF-201ENST00000339430 USP38Q8NB14 1042 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms