RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 C6orf118Q5T5N4 469 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 C6orf163Q5TEZ5 329 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 PDCD7Q8N8D1 485 aaKnown RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 USP38Q8NB14 1042 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 MPP4Q96JB8 637 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 GPR101Q96P66 508 aaPredicted RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 NR1H4Q96RI1 486 aaPredicted RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 TGS1Q96RS0 853 aaKnown RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 TRIM51Q9BSJ1 452 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 CUEDC2Q9H467 287 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 SEPT11Q9NVA2 429 aaKnown RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 RASAL2Q9UJF2 1139 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 PCDHA6Q9UN73 950 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 PCDHA8Q9Y5H6 950 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 BICDL2A1A5D9 508 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 CAPN9O14815 690 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 LSM1O15116 133 aaKnown RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 FAM163BP0C2L3 166 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 EPHB2P29323 1055 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 BPIFB4P59827 614 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 ECM1Q16610 540 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 NME8Q8N427 588 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 GIMAP8Q8ND71 665 aaPredicted RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 MORC4Q8TE76 937 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 PRPF31Q8WWY3 499 aaKnown RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 LZTS2Q9BRK4 669 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 TAOK3Q9H2K8 898 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 DNAJC17Q9NVM6 304 aaKnown RBP9.99□□□□□ -0.81
RPGR-202ENST00000339363 NMRK1Q9NWW6 199 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 TBK1Q9UHD2 729 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 CENPFP49454 3210 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
RPGR-202ENST00000339363 NPHP3-ACAD11A0A0J9YXS1 232 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 F8VZ95 297 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 LMNAP02545 664 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 PMS2P54278 862 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 IGBP1P78318 339 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 RINLQ6ZS11 566 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DYMQ7RTS9 669 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 CATIPQ7Z7H3 387 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 AGGF1Q8N302 714 aaeCLIP9.98□□□□□ -0.81
RPGR-202ENST00000339363 ZMAT2Q96NC0 199 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 RXFP1Q9HBX9 757 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 KBTBD4Q9NVX7 518 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 TMEM260Q9NX78 707 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 LRP5O75197 1615 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 GRID2IPA4D2P6 1211 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 ACADSP16219 412 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 EIF4BP23588 611 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 PFKFB3Q16875 520 aaPredicted RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 SGSM1Q2NKQ1 1148 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 SPTY2D1Q68D10 685 aaPredicted RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 INTS5Q6P9B9 1019 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 SUPT20HQ8NEM7 779 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 CELF1Q92879 486 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 NACAP1Q9BZK3 213 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DCP1AQ9NPI6 582 aaPredicted RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 ETNK2Q9NVF9 386 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DDX18Q9NVP1 670 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 ADAMTS1Q9UHI8 967 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
RPGR-202ENST00000339363 BMP15O95972 392 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 MLH1P40692 756 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 TECP42680 631 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 MECOMQ03112 1051 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 KLHL30Q0D2K2 578 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DDB1Q16531 1140 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 SFMBT2Q5VUG0 894 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 FITM2Q8N6M3 262 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 C1orf131Q8NDD1 294 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 FAM84BQ96KN1 310 aaPredicted RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 PYM1Q9BRP8 204 aaKnown RBP9.98□□□□□ -0.81
RPGR-202ENST00000339363 FAM192AQ9GZU8 254 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DCLRE1BQ9H816 532 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 SPATA7Q9P0W8 599 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 PHF24Q9UPV7 400 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 SIK3Q9Y2K2 1263 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 LRRC42Q9Y546 428 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 MROH5Q6ZUA9 1318 aa9.98□□□□□ -0.81
RPGR-202ENST00000339363 DYTNA2CJ06 578 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 TPBGLP0DKB5 382 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 FUT4P22083 530 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 VPS41P49754 854 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CACNB1Q02641 598 aaPredicted RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 BNIP1Q12981 228 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 SLC29A2Q14542 456 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 ZCWPW2Q504Y3 356 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 EMC10Q5UCC4 262 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 DNAJC14Q6Y2X3 702 aaPredicted RBP9.97□□□□□ -0.81
RPGR-202ENST00000339363 CLEC10AQ8IUN9 316 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 CFAP61Q8NHU2 1237 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.97□□□□□ -0.81
RPGR-202ENST00000339363 PBKQ96KB5 322 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 OLFM3Q96PB7 478 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 TRIM9Q9C026 710 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 NEUROG2Q9H2A3 272 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 IKZF4Q9H2S9 585 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 UBAP1Q9NZ09 502 aa9.97□□□□□ -0.81
RPGR-202ENST00000339363 ZNF180Q9UJW8 692 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms