RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 EIF4A3P38919 411 aaKnown RBP24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 CDK17Q00537 523 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 ARID5AQ03989 594 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 EMC2Q15006 297 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 EDEM3Q9BZQ6 932 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 GCNT4Q9P109 453 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 LRRC37A2A6NM11 1700 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 ARID2Q68CP9 1835 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 TLR2O60603 784 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 ECM2O94769 699 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 STAT5BP51692 787 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 FKBP1BP68106 108 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 ENOX2Q16206 610 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 TRIM50Q86XT4 487 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 SHCBP1Q8NEM2 672 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 SEPT1Q8WYJ6 367 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 PTPN18Q99952 460 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 HSPBP1Q9NZL4 362 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 GOLGA8IPA6NC78 632 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 GOLGA8JA6NMD2 632 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 ZNF263O14978 683 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 URI1O94763 535 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 MARK3P27448 753 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 DLG4P78352 724 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 RAPGEF1Q13905 1077 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 CBWD6Q4V339 395 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 CBWD3Q5JTY5 395 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 ZNF569Q5MCW4 686 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 CBWD5Q5RIA9 395 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 SPRYD7Q5W111 196 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 CST9Q5W186 159 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 GBP6Q6ZN66 633 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 CCDC170Q8IYT3 715 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 GUCA1BQ9UMX6 200 aa24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 ZNFX1Q9P2E3 1918 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-203ENST00000339162 RCCD1A6NED2 376 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 KIF5CO60282 957 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 GJB7Q6PEY0 223 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 DEF6Q9H4E7 631 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 FHOD1Q9Y613 1164 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 PCNTO95613 3336 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 EIF3CLB5ME19 914 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 UCHL3P15374 230 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 ADORA2AP29274 412 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 ADSSP30520 456 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 FMO5P49326 533 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 BFSP1Q12934 665 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 NAA30Q147X3 362 aaPredicted RBP24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 KLHDC7AQ5VTJ3 777 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 SFMBT2Q5VUG0 894 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 HGSNATQ68CP4 663 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 EIF3CQ99613 913 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 NTPCRQ9BSD7 190 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 USP20Q9Y2K6 914 aa24.5■■□□□ 1.51
PDLIM2-203ENST00000339162 CNGA1P29973 690 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 KIF11P52732 1056 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 CCNA1P78396 465 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 TDRD12Q587J7 1177 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 CELF3Q5SZQ8 465 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 KIAA1328Q86T90 577 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 MAP4K3Q8IVH8 894 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 SPIRE2Q8WWL2 714 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 AJAP1Q9UKB5 411 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 ZNF215Q9UL58 517 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 NOP56O00567 594 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 TXNP10599 105 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 KRT83P78385 493 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 ARMCX2Q7L311 632 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 ANKRD23Q86SG2 305 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 XXYLT1Q8NBI6 393 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 GLG1Q92896 1179 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 SAAL1Q96ER3 474 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 GPR20Q99678 358 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 LACRTQ9GZZ8 138 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 C17orf75Q9HAS0 396 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 SIX2Q9NPC8 291 aa24.49■■□□□ 1.51
PDLIM2-203ENST00000339162 DYNC1I1O14576 645 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 AKR1B10O60218 316 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 IPO7O95373 1038 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 DHX37Q8IY37 1157 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 SLC17A8Q8NDX2 589 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 IFT74Q96LB3 600 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 SPATA33Q96N06 139 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 CEP89Q96ST8 783 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 DHX33Q9H6R0 707 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 L2HGDHQ9H9P8 463 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 PLCB1Q9NQ66 1216 aa24.48■■□□□ 1.51
PDLIM2-203ENST00000339162 MYBPC2Q14324 1141 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 CCDC122Q5T0U0 273 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 GJC2Q5T442 439 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 FAM160B1Q5W0V3 765 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 CCDC62Q6P9F0 684 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 SLC35F6Q8N357 371 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 LRRN4CLQ8ND94 238 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 ASAP3Q8TDY4 903 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 GTF3C2Q8WUA4 911 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 SLC7A3Q8WY07 619 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 NIFKQ9BYG3 293 aaKnown RBP24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 AZI2Q9H6S1 392 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 SLC45A1Q9Y2W3 748 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms