RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PBKQ96KB5 322 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 YY1AP1Q9H869 796 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 MID2Q9UJV3 735 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PCDHGB4Q9UN71 923 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 AURKCQ9UQB9 309 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 MAP3K15Q6ZN16 1313 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 RASA4BC9J798 803 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 RASA4O43374 803 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ATXN3P54252 364 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ETF1P62495 437 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 TEX9Q8N6V9 391 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 BHMT2Q9H2M3 363 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 DDX28Q9NUL7 540 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 CDC23Q9UJX2 597 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 GH2P01242 217 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 TCF3P15923 654 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 EPM2AIP1Q7L775 607 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 LCORLQ8N3X6 602 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 NDUFB5O43674 189 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 ADCY3O60266 1144 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 PDE8BO95263 885 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 NUMBP49757 651 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 OR9Q1Q8NGQ5 310 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 LRRC37BQ96QE4 947 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 LZTS1Q9Y250 596 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 MAP3K7CLP57077 242 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 SURF1Q15526 300 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 DEPDC1Q5TB30 811 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 PDXDC1Q6P996 788 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 WDR75Q8IWA0 830 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 GUCA1CO95843 209 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 MAP4P27816 1152 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 E2F4Q16254 413 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 PYGBP11216 843 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 GCLMP48507 274 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 MAPK6Q16659 721 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 SYTL3Q4VX76 610 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 PPP1R14AQ96A00 147 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 MAGEB10Q96LZ2 347 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 RMDN3Q96TC7 470 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 SRP68Q9UHB9 627 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 RRP15Q9Y3B9 282 aaKnown RBP12.53□□□□□ -0.4
SHANK2-201ENST00000338508 ABCC12Q96J65 1359 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 CHRNA3P32297 505 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 COPB2P35606 906 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 ADNPQ9H2P0 1102 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 ZNF229Q9UJW7 825 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 MTMR6Q9Y217 621 aa12.53□□□□□ -0.4
SHANK2-201ENST00000338508 TRIM60Q495X7 471 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 PI16Q6UXB8 463 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.4
SHANK2-201ENST00000338508 FAM81BQ96LP2 452 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 TRIM54Q9BYV2 358 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 SLC16A4O15374 487 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 PHKG2P15735 406 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 RWDD2BP57060 319 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 KIZQ2M2Z5 673 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.4
SHANK2-201ENST00000338508 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.4
SHANK2-201ENST00000338508 E9PMD0 336 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 LAD1O00515 517 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 SLC9A1P19634 815 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 MRPL28Q13084 256 aaKnown RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 STX19Q8N4C7 294 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 RAB42Q8N4Z0 105 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 RAET1EQ8TD07 263 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 NEK9Q8TD19 979 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 UHRF1BP1Q6BDS2 1440 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ITSN2Q9NZM3 1697 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 AKT1P31749 480 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 SPARCL1Q14515 664 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 MMP19Q99542 508 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 DHX35Q9H5Z1 703 aaKnown RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 FSCBQ5H9T9 825 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 GPT2Q8TD30 523 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 MTBPQ96DY7 904 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 TUBB6Q9BUF5 446 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms