RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ELAC1Q9H777 363 aaKnown RBP15□□□□□ -0.01
NUDCD3-201ENST00000338427 CLEC1BQ9P126 229 aa15□□□□□ -0.01
NUDCD3-201ENST00000338427 PI4K2BG5E9Z4 385 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 GLP2RO95838 553 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 SRGAP2CP0DJJ0 459 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 XBP1P17861 261 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 ATP2B1P20020 1258 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 KRT2P35908 639 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 CYP4A11Q02928 519 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 ANKRD1Q15327 319 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 EPHA7Q15375 998 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 FAM177A1Q8N128 213 aaPredicted RBP14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 VN1R2Q8NFZ6 395 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 NLRP4Q96MN2 994 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 TLE6Q9H808 572 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 MINDY3Q9H8M7 445 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 CYP26B1Q9NR63 512 aa14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 BARX2Q9UMQ3 279 aaPredicted RBP14.99□□□□□ -0.01
NUDCD3-201ENST00000338427 A0A0U1RQF3 1178 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 SLITRK3O94933 977 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 P4HBP07237 508 aaKnown RBP14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 NDUFV1P49821 464 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 DNM2P50570 870 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 SPIRE1Q08AE8 756 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 ERICH6BQ5W0A0 696 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 KCNT2Q6UVM3 1135 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 TPH2Q8IWU9 490 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 PRPF31Q8WWY3 499 aaKnown RBP14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 MSLNLQ96KJ4 702 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 IFT122Q9HBG6 1241 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 AAASQ9NRG9 546 aa14.98□□□□□ -0.01
NUDCD3-201ENST00000338427 HIDE1A8MVS5 230 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 NCK2O43639 380 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 AFF1P51825 1210 aaKnown RBP14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 ZP2Q05996 745 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 PUS10Q3MIT2 529 aaKnown RBP14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 PLPP4Q5VZY2 271 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 EFHBQ8N7U6 833 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 LXNQ9BS40 222 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 APOL5Q9BWW9 433 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 TMEM60Q9H2L4 133 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 CD207Q9UJ71 328 aa14.97□□□□□ -0.01
NUDCD3-201ENST00000338427 C19orf67A6NJJ6 358 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 FSCN2O14926 492 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 GCFC2P16383 781 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 TXKP42681 527 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 PHKA2P46019 1235 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 SMAD2Q15796 467 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 CATSPER4Q7RTX7 472 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 CCDC83Q8IWF9 413 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 C4orf19Q8IY42 314 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 DIS3L2Q8IYB7 885 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 ABI1Q8IZP0 508 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 MRPS27Q92552 414 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 WASF1Q92558 559 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 EIF2AK1Q9BQI3 630 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 DHX33Q9H6R0 707 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 TLR9Q9NR96 1032 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 PIN4Q9Y237 131 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 COL4A3BPQ9Y5P4 624 aa14.96□□□□□ -0.01
NUDCD3-201ENST00000338427 TBX3O15119 743 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 EOMESO95936 686 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 LAG3P18627 525 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 YWHABP31946 246 aaKnown RBP14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 POLGP54098 1239 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 PLCB3Q01970 1234 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 LAMTOR4Q0VGL1 99 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 TMEM31Q5JXX7 168 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 TWF2Q6IBS0 349 aaKnown RBP14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 LLGL2Q6P1M3 1020 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 TMEM173Q86WV6 379 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 ADHFE1Q8IWW8 467 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 ZNF558Q96NG5 402 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 XPNPEP1Q9NQW7 623 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 CHST12Q9NRB3 414 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 SPG21Q9NZD8 308 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 PCDHA12Q9UN75 941 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 INPP5FQ9Y2H2 1132 aa14.95□□□□□ -0.02
NUDCD3-201ENST00000338427 B4GALT3O60512 393 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 OFD1O75665 1012 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 HOXA11P31270 313 aaPredicted RBP14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 BCAR1P56945 870 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 CDC42EP1Q00587 391 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 UBE3AQ05086 875 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 SMAD4Q13485 552 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 CALCRLQ16602 461 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 DUSP6Q16828 381 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 UBXN11Q5T124 520 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 KANK3Q6NY19 840 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 TMC7Q7Z402 723 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 ZNF410Q86VK4 478 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 ZNF280BQ86YH2 543 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 SLC39A11Q8N1S5 342 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 ZNF710Q8N1W2 664 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms