RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RAD51AP2Q09MP3 1159 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 GIT2Q14161 759 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 LPIN1Q14693 890 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 FBXO47Q5MNV8 452 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 DEPTORQ8TB45 409 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 LRRC15Q8TF66 581 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 ZNF668Q96K58 619 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 OSMRQ99650 979 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 POLD4Q9HCU8 107 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 MYMKA6NI61 221 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 SFI1A8K8P3 1242 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 CXCL10P02778 98 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 ACRP10323 421 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 GHRP10912 638 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 NAMPTP43490 491 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 PTENP60484 403 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 PAK2Q13177 524 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 IKBKEQ14164 716 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 MBTPS1Q14703 1052 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 TSHZ1Q6ZSZ6 1077 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 DYMQ7RTS9 669 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 DDX12PQ92771 950 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 APBB2Q92870 758 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
SPTLC1-202ENST00000337841 H0YCG3 227 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PLS3P13797 630 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 IDEP14735 1019 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 GAP43P17677 238 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 AFMP43652 599 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 EFNA5P52803 228 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PEX3P56589 373 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 DMP1Q13316 513 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 CAPSQ13938 189 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 GPNMBQ14956 572 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PCBP1Q15365 356 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 CNKSR3Q6P9H4 555 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 STAMQ92783 540 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 GDF15Q99988 308 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PARVGQ9HBI0 331 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 KAT6AQ92794 2004 aa13.16□□□□□ -0.3
SPTLC1-202ENST00000337841 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 K7ERI5 159 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 ACTN4O43707 911 aaKnown RBP13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 EFCAB14O75071 495 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 MYL1P05976 194 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 SCP2P22307 547 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 CD52P31358 61 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 BMP8BP34820 402 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 NPTX2P47972 431 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 MAPK7Q13164 816 aa13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 HERC4Q5GLZ8 1057 aaPredicted RBP13.15□□□□□ -0.3
SPTLC1-202ENST00000337841 TMEM240Q5SV17 173 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms