RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 BRWD1Q9NSI6 2320 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 PRR33A8MZF0 331 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 PER2O15055 1255 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 EDIL3O43854 480 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 TBX10O75333 385 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 DARSP14868 501 aaKnown RBP11.97□□□□□ -0.49
CAPN3-202ENST00000337571 PLA2G5P39877 138 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 PSMC5P62195 406 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 BMS1Q14692 1282 aaKnown RBP11.97□□□□□ -0.49
CAPN3-202ENST00000337571 ANKRD1Q15327 319 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 INF2Q27J81 1249 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 ECHDC2Q86YB7 292 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 EXOC8Q8IYI6 725 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 LINC01465Q8N7H1 131 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 WASF1Q92558 559 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 ZNF558Q96NG5 402 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 CDCA3Q99618 268 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-202ENST00000337571 CHST12Q9NRB3 414 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
CAPN3-202ENST00000337571 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-202ENST00000337571 A0A0U1RQF3 1178 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 M0R2N6 131 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 CCNT1O60563 726 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 SKIP12755 728 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 PPM1AP35813 382 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 ALDH7A1P49419 539 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 ERVFC1P60507 584 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 PLCB3Q01970 1234 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 COASYQ13057 564 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 TARBP2Q15633 366 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 KCNT2Q6UVM3 1135 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 MRPS27Q92552 414 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 MSLNLQ96KJ4 702 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 MBOAT7Q96N66 472 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 CASD1Q96PB1 797 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 CWH43Q9H720 699 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 NGRNQ9NPE2 291 aaKnown RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 ENTPD7Q9NQZ7 604 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 SUCLA2Q9P2R7 463 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-202ENST00000337571 LZTS1Q9Y250 596 aa11.96□□□□□ -0.49
CAPN3-202ENST00000337571 MYO7AQ13402 2215 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 A0A087WZ62 844 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 MAFO75444 373 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 CSDE1O75534 798 aaKnown RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 EYA4O95677 639 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 FGFR4P22455 802 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 SCRN1Q12765 414 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 OTUD6AQ7L8S5 288 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 TMC7Q7Z402 723 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 ETNPPLQ8TBG4 499 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 SH2D3AQ9BRG2 576 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 PHF20Q9BVI0 1012 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 MRPL9Q9BYD2 267 aaKnown RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 BRMS1Q9HCU9 246 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 C11orf16Q9NQ32 467 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 CLEC1BQ9P126 229 aa11.95□□□□□ -0.5
CAPN3-202ENST00000337571 BARX2Q9UMQ3 279 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-202ENST00000337571 STK36Q9NRP7 1315 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 TRIOO75962 3097 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 CARNS1A5YM72 827 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 TMEM150BA6NC51 233 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 PFKFB2O60825 505 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
CAPN3-202ENST00000337571 CA8P35219 290 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-202ENST00000337571 ANAPC15P60006 121 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 DRP2Q13474 957 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 DUSP6Q16828 381 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 PLPP4Q5VZY2 271 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 B3GNT9Q6UX72 402 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 PIK3AP1Q6ZUJ8 805 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 ANO5Q75V66 913 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 RNF135Q8IUD6 432 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 SMRP1Q8NCR6 262 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 HELQQ8TDG4 1101 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 RSPH1Q8WYR4 309 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
CAPN3-202ENST00000337571 NLRP4Q96MN2 994 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms