RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 USP17L8P0C7I0 530 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 PLA2G4BP0C869 781 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 MARK3P27448 753 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 ACBD5Q5T8D3 534 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 TTBK2Q6IQ55 1244 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 ISLR2Q6UXK2 745 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 PABPC3Q9H361 631 aaKnown RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 USP31Q70CQ4 1352 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 CLTCQ00610 1675 aaKnown RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 SYNGAP1Q96PV0 1343 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 FAM187AA6NFU0 413 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 PRLRP16471 622 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 USP11P51784 963 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 MDM2Q00987 491 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 OVGP1Q12889 678 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 PFKFB3Q16875 520 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 NXNQ6DKJ4 435 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 WDR59Q6PJI9 974 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 ARHGAP18Q8N392 663 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 GUF1Q8N442 669 aaKnown RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 NMD3Q96D46 503 aaKnown RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 KLF6Q99612 283 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 IMPG2Q9BZV3 1241 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 SEMA4AQ9H3S1 761 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 TMEM165Q9HC07 324 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 RGL1Q9NZL6 768 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 SETBP1Q9Y6X0 1596 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 GSTA1P08263 222 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 PECAM1P16284 738 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 ITIH4Q14624 930 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 SUSD4Q5VX71 490 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 ERGIC2Q96RQ1 377 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 GINM1Q9NU53 330 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 PAIP2BQ9ULR5 123 aaKnown RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 A8MUI8 341 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 F8VZ95 297 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 GHRP10912 638 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 CHRNA3P32297 505 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 VHLP40337 213 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 COASYQ13057 564 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 LGSNQ5TDP6 509 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 C3orf20Q8ND61 904 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 FNBP1Q96RU3 617 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 TOM1L1O75674 476 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 ATP6V1B1P15313 513 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 NCF2P19878 526 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 FOXO4P98177 505 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 WDR44Q5JSH3 913 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 TTI2Q6NXR4 508 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 PSTPIP2Q9H939 334 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
COL2A1-201ENST00000337299 TRAF3IP3Q9Y228 551 aa14.18□□□□□ -0.14
COL2A1-201ENST00000337299 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 CCDC195A0A1B0GUA6 201 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 SHBGP04278 402 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 ENO1P06733 434 aaKnown RBP14.17□□□□□ -0.14
COL2A1-201ENST00000337299 RFX5P48382 616 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-201ENST00000337299 PHEXP78562 749 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 THOC5Q13769 683 aaKnown RBP14.17□□□□□ -0.14
COL2A1-201ENST00000337299 MAP3K21Q5TCX8 1036 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 RAB20Q9NX57 234 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 PNMA3Q9UL41 463 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 COL3A1P02461 1466 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-201ENST00000337299 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 ATP9AO75110 1047 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 TMPRSS15P98073 1019 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 TCP10Q12799 353 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 BBOF1Q8ND07 529 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 PPWD1Q96BP3 646 aaKnown RBP14.17□□□□□ -0.14
COL2A1-201ENST00000337299 DTNBP1Q96EV8 351 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 OLFM3Q96PB7 478 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 MAD1L1Q9Y6D9 718 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 AP2B1P63010 937 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 KRT17Q04695 432 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 DRAP1Q14919 205 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-201ENST00000337299 ERFEQ4G0M1 354 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 GRAMD4Q6IC98 578 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 GALNT17Q6IS24 598 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 KRT80Q6KB66 452 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 SLC35G2Q8TBE7 412 aa14.17□□□□□ -0.14
COL2A1-201ENST00000337299 FTLP02792 175 aaPredicted RBP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 MED21Q13503 144 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 NTRK3Q16288 839 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 ODR4Q5SWX8 454 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 IQCKQ8N0W5 287 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 MARCOQ9UEW3 520 aaPredicted RBP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 PSMC2P35998 433 aaKnown RBP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 GTF2IP78347 998 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 RASA3Q14644 834 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms