RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GOLGA4Q13439 2230 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 NUP188Q5SRE5 1749 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 GOLGA8KD6RF30 607 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 TLR2O60603 784 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 SYF2O95926 243 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 POTEJP0CG39 1038 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 PPP2R5DQ14738 602 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 WDR44Q5JSH3 913 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 SLC27A3Q5K4L6 730 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 PAPD7Q5XG87 772 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 RINT1Q6NUQ1 792 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 PNMA2Q9UL42 364 aa8.89□□□□□ -0.99
HPS4-201ENST00000336873 MRPL11Q9Y3B7 192 aaKnown RBP8.89□□□□□ -0.99
HPS4-201ENST00000336873 GRID2IPA4D2P6 1211 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 FOXO6A8MYZ6 492 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 NFIBO00712 420 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 CSDE1O75534 798 aaKnown RBP8.88□□□□□ -0.99
HPS4-201ENST00000336873 LIG4P49917 911 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 DLG4P78352 724 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 AMPD2Q01433 879 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 MTMR1Q13613 665 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 CEP55Q53EZ4 464 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 LLGL2Q6P1M3 1020 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 MASTLQ96GX5 879 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 C11orf70Q9BRQ4 267 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 KMT5AQ9NQR1 393 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SAMD15Q9P1V8 674 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 ANAPC7Q9UJX3 599 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 ZNF148Q9UQR1 794 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SIK3Q9Y2K2 1263 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 MAP3K6O95382 1288 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 FOSP01100 380 aaPredicted RBP8.88□□□□□ -0.99
HPS4-201ENST00000336873 FXR2P51116 673 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-201ENST00000336873 SWSAP1Q6NVH7 229 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 RUFY4Q6ZNE9 571 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 DNAJC19Q96DA6 116 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 MTMR9Q96QG7 549 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 KCND1Q9NSA2 647 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 TYW1Q9NV66 732 aaKnown RBP8.88□□□□□ -0.99
HPS4-201ENST00000336873 TSKSQ9UJT2 592 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 AGTPBP1Q9UPW5 1226 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 DENND3A2RUS2 1198 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 RASSF10A6NK89 507 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 MAP2K7O14733 419 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 FERP16591 822 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 POLD1P28340 1107 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 MAPK4P31152 587 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 CBWD6Q4V339 395 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SGO2Q562F6 1265 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 CBWD3Q5JTY5 395 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 CBWD5Q5RIA9 395 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 PPP4R3AQ6IN85 833 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 EMBQ6PCB8 327 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 LRRC55Q6ZSA7 311 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 HOOK3Q86VS8 718 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SP8Q8IXZ3 490 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 KIRREL3Q8IZU9 778 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SYCE1Q8N0S2 351 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 INTS9Q9NV88 658 aaKnown RBP8.88□□□□□ -0.99
HPS4-201ENST00000336873 CEP83Q9Y592 693 aa8.88□□□□□ -0.99
HPS4-201ENST00000336873 SCN11AQ9UI33 1791 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 SYNJ2BP-COX16A0A087WUM0 186 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 CLDN3O15551 220 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 THAP12O43422 761 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 GJB6O95452 261 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 GBP2P32456 591 aaPredicted RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 CETN2P41208 172 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 FMO5P49326 533 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 PDE6CP51160 858 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 C10orf76Q5T2E6 689 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 HAUS6Q7Z4H7 955 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 TBC1D1Q86TI0 1168 aaPredicted RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 PRUNE1Q86TP1 453 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 PALB2Q86YC2 1186 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 NIM1KQ8IY84 436 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 THNSL1Q8IYQ7 743 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 ANKRD35Q8N283 1001 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 PPP1R13LQ8WUF5 828 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 C18orf8Q96DM3 657 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 INTS2Q9H0H0 1204 aaKnown RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 EFCC1Q9HA90 598 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 ALG13Q9NP73 1137 aaKnown RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 COX16Q9P0S2 106 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 PPP1R9AQ9ULJ8 1098 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 FLT3P36888 993 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 DMP1Q13316 513 aaPredicted RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 ORC1Q13415 861 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 LONRF1Q17RB8 773 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 HIBCHQ6NVY1 386 aaPredicted RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 CBWD2Q8IUF1 395 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 ELOA2Q8IYF1 753 aaPredicted RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 CACNA2D3Q8IZS8 1091 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 TMEM143Q96AN5 459 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 C9orf72Q96LT7 481 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 TAF1DQ9H5J8 278 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms