RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 LSG1Q9H089 658 aaKnown RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 PRDM5Q9NQX1 630 aaPredicted RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 SELENONQ9NZV5 590 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 SNX8Q9Y5X2 465 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 RNASEH2AO75792 299 aaKnown RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 SH3TC2Q8TF17 1288 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 GLMNQ92990 594 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 SNX27Q96L92 541 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 STRIP2Q9ULQ0 834 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 IL12AP29459 219 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 STARP49675 285 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 TTC30BQ8N4P2 665 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 ANKRD53Q8N9V6 530 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 TEKT3Q9BXF9 490 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 POLIQ9UNA4 740 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 TTC4O95801 387 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 TKTP29401 623 aaKnown RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 RPL26P61254 145 aaKnown RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 NOL6Q9H6R4 1146 aaKnown RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 SNX5Q9Y5X3 404 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 PRDM1O75626 825 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 CALB1P05937 261 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 MYCLP1P12525 358 aaPredicted RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 EHD1Q9H4M9 534 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 MARCH7Q9H992 704 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 C2orf74A8MZ97 194 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 FYNP06241 537 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 NLRP6P59044 892 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 PURAQ00577 322 aaKnown RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 XRCC4Q13426 336 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 NET1Q7Z628 596 aaPredicted RBP5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 IRF2BPLQ9H1B7 796 aa5.68□□□□□ -1.5
TNRC6B-202ENST00000335727 TESPA1A2RU30 521 aaPredicted RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 RPL13P26373 211 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 RRS1Q15050 365 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 GGT6Q6P531 493 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 NCLNQ969V3 563 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CALML4Q96GE6 196 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TIAM1Q13009 1591 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ARHGAP5Q13017 1502 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 RPS6KA1Q15418 735 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TRIM67Q6ZTA4 783 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 MARCH10Q8NA82 808 aaPredicted RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TTLL11Q8NHH1 800 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CCDC188H7C350 402 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 SPTLC2O15270 562 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 RCVRNP35243 200 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 POU5F1BQ06416 359 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TTC27Q6P3X3 843 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 SLC10A4Q96EP9 437 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ZFYVE1Q9HBF4 777 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 GAPVD1Q14C86 1478 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 H7C0S8 307 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CHKAP35790 457 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CARSP49589 748 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ZFP69BQ9UJL9 534 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 PARP3Q9Y6F1 533 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ARHGEF12Q9NZN5 1544 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 EIF2AK4Q9P2K8 1649 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 MFAP3LO75121 409 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 GNAI2P04899 355 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 DNM1Q05193 864 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 MCL1Q07820 350 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 PUDPQ08623 228 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TTC39AQ5SRH9 613 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 KRT77Q7Z794 578 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TBC1D5Q92609 795 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 LBHD1Q9BQE6 289 aaPredicted RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TMEM114B3SHH9 223 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 DNAJC6O75061 913 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CDC27P30260 824 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ETV3P41162 512 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 KIRREL3Q8IZU9 778 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 SPARTQ8N0X7 666 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 DACH2Q96NX9 599 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 SPATA16Q9BXB7 569 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 SMG5Q9UPR3 1016 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 WRBO00258 174 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CACNA2D1P54289 1103 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 NFIAQ12857 509 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 MORC3Q14149 939 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ZNF658Q5TYW1 1059 aaPredicted RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 NIPAL1Q6NVV3 410 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 ARMCX5Q6P1M9 558 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 COG4Q9H9E3 785 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 LCMT1Q9UIC8 334 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CCDC78A2IDD5 438 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 YAP1P46937 504 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 CLPPQ16740 277 aaPredicted RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 DUS1LQ6P1R4 473 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 TOM1L2Q6ZVM7 507 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 NEDD1Q8NHV4 660 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 XPO4Q9C0E2 1151 aaKnown RBP5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 KRT84Q9NSB2 600 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 SLC15A2Q16348 729 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 UGP2Q16851 508 aa5.67□□□□□ -1.5
TNRC6B-202ENST00000335727 RIC3Q7Z5B4 369 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms