RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 KCNB1Q14721 858 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 LRRC14Q15048 493 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
TPCN1-201ENST00000335509 METTL23Q86XA0 190 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 SYT2Q8N9I0 419 aaPredicted RBP17.07■□□□□ 0.32
TPCN1-201ENST00000335509 DEPDC1BQ8WUY9 529 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 LXNQ9BS40 222 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 RNF146Q9NTX7 359 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 MAP3K4Q9Y6R4 1608 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 PMS2P54278 862 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 TFDP2Q14188 446 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
TPCN1-201ENST00000335509 RAB44Q7Z6P3 723 aaPredicted RBP17.07■□□□□ 0.32
TPCN1-201ENST00000335509 SNRNP48Q6IEG0 339 aaKnown RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 TRIM55Q9BYV6 548 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 DCTN4Q9UJW0 460 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 NOC2LQ9Y3T9 749 aaKnown RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 EMSYQ7Z589 1322 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 GRAMD1BQ3KR37 738 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 BEGAINQ9BUH8 593 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 TRIM4Q9C037 500 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 GABBR1Q9UBS5 961 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 OSBPP22059 807 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 NMT1P30419 496 aaKnown RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 KRT76Q01546 638 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 KRT39Q6A163 491 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 SWSAP1Q6NVH7 229 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 RPAINQ86UA6 219 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 INTS2Q9H0H0 1204 aaKnown RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 LPXNO60711 386 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 ANTXR2P58335 489 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 PPP2R2AP63151 447 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 GPSM2P81274 684 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 PDXDC1Q6P996 788 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 WDR75Q8IWA0 830 aaKnown RBP17.06■□□□□ 0.32
TPCN1-201ENST00000335509 SEL1LQ9UBV2 794 aa17.06■□□□□ 0.32
TPCN1-201ENST00000335509 ART3Q13508 389 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 ZNF699Q32M78 642 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 HSP90AA5PQ58FG0 334 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 ADSSL1Q8N142 457 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 N4BP2L2Q92802 583 aaPredicted RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 EIF2AK1Q9BQI3 630 aaKnown RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 USP42Q9H9J4 1324 aaKnown RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 FGD4Q96M96 766 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 KLC2Q9H0B6 622 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 KIAA1586Q9HCI6 787 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 SNX12Q9UMY4 172 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 STXBP2Q15833 593 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 C1orf54Q8WWF1 131 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 RFFLQ8WZ73 363 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 TRIM10Q9UDY6 481 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 ORC2Q13416 577 aaPredicted RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 ATG16L1Q676U5 607 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 MMS22LQ6ZRQ5 1243 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 HAUS6Q7Z4H7 955 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 PPM1NQ8N819 430 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 NSUN6Q8TEA1 469 aaKnown RBP17.05■□□□□ 0.32
TPCN1-201ENST00000335509 RNF139Q8WU17 664 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 HVCN1Q96D96 273 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 GOLGA8QA0A0J9YX86 632 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 GOLGA8OA6NCC3 632 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 GOLGA8NF8WBI6 632 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 GYG2O15488 501 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 OCRLQ01968 901 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 CRLF3Q8IUI8 442 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 PIP4K2CQ8TBX8 421 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 TUBB6Q9BUF5 446 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 EFHD1Q9BUP0 239 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 SCOCQ9UIL1 159 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
TPCN1-201ENST00000335509 WRNIP1Q96S55 665 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 CHRNA3P32297 505 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 POLE2P56282 527 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 PRPF38AQ8NAV1 312 aaKnown RBP17.04■□□□□ 0.32
TPCN1-201ENST00000335509 PSPC1Q8WXF1 523 aaKnown RBP17.04■□□□□ 0.32
TPCN1-201ENST00000335509 EDEM3Q9BZQ6 932 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 KRT38O76015 456 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 USP11P51784 963 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 DSTYKQ6XUX3 929 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 RTKN2Q8IZC4 609 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
TPCN1-201ENST00000335509 PHF20Q9BVI0 1012 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 MGEA5O60502 916 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms