RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SPATA4Q8NEY3 305 aa15.08■□□□□ 0
SF1-202ENST00000334944 TATDN2Q93075 761 aa15.08■□□□□ 0
SF1-202ENST00000334944 NOX5Q96PH1 765 aa15.08■□□□□ 0
SF1-202ENST00000334944 TMX2Q9Y320 296 aa15.08■□□□□ 0
SF1-202ENST00000334944 ATRNL1Q5VV63 1379 aa15.08■□□□□ 0
SF1-202ENST00000334944 PITPNM2Q9BZ72 1349 aa15.07■□□□□ 0
SF1-202ENST00000334944 TISP43B9A030 160 aa15.07■□□□□ 0
SF1-202ENST00000334944 KIF4AO95239 1232 aa15.07■□□□□ 0
SF1-202ENST00000334944 EGFRP00533 1210 aa15.07■□□□□ 0
SF1-202ENST00000334944 CLTAP09496 248 aa15.07■□□□□ 0
SF1-202ENST00000334944 UCHL3P15374 230 aa15.07■□□□□ 0
SF1-202ENST00000334944 SCTRP47872 440 aa15.07■□□□□ 0
SF1-202ENST00000334944 PPP1R7Q15435 360 aa15.07■□□□□ 0
SF1-202ENST00000334944 EXOC3L4Q17RC7 722 aa15.07■□□□□ 0
SF1-202ENST00000334944 MOXD1Q6UVY6 613 aa15.07■□□□□ 0
SF1-202ENST00000334944 BTNL9Q6UXG8 535 aa15.07■□□□□ 0
SF1-202ENST00000334944 IL31RAQ8NI17 732 aa15.07■□□□□ 0
SF1-202ENST00000334944 RBM46Q8TBY0 533 aaKnown RBP15.07■□□□□ 0
SF1-202ENST00000334944 HSD17B14Q9BPX1 270 aa15.07■□□□□ 0
SF1-202ENST00000334944 ZNF577Q9BSK1 485 aa15.07■□□□□ 0
SF1-202ENST00000334944 ATP6V0A4Q9HBG4 840 aa15.07■□□□□ 0
SF1-202ENST00000334944 RBM12Q9NTZ6 932 aaKnown RBP15.07■□□□□ 0
SF1-202ENST00000334944 CNTNAP1P78357 1384 aa15.07■□□□□ 0
SF1-202ENST00000334944 TBX3O15119 743 aa15.07■□□□□ 0
SF1-202ENST00000334944 LCA5LO95447 670 aa15.07■□□□□ 0
SF1-202ENST00000334944 TRIM49P0CI25 452 aa15.07■□□□□ 0
SF1-202ENST00000334944 TRIM49CP0CI26 452 aa15.07■□□□□ 0
SF1-202ENST00000334944 PON1P27169 355 aa15.07■□□□□ 0
SF1-202ENST00000334944 CIITAP33076 1130 aa15.07■□□□□ 0
SF1-202ENST00000334944 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
SF1-202ENST00000334944 ANKRD20A8PQ5CZ79 823 aa15.07■□□□□ 0
SF1-202ENST00000334944 C6orf89Q6UWU4 347 aa15.07■□□□□ 0
SF1-202ENST00000334944 ZNF571Q7Z3V5 609 aaPredicted RBP15.07■□□□□ 0
SF1-202ENST00000334944 LDHDQ86WU2 507 aa15.07■□□□□ 0
SF1-202ENST00000334944 RSRC1Q96IZ7 334 aaKnown RBP15.07■□□□□ 0
SF1-202ENST00000334944 ZCWPW1Q9H0M4 648 aa15.07■□□□□ 0
SF1-202ENST00000334944 UNC45AQ9H3U1 944 aa15.07■□□□□ 0
SF1-202ENST00000334944 GOPCQ9HD26 462 aa15.07■□□□□ 0
SF1-202ENST00000334944 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
SF1-202ENST00000334944 NFIBO00712 420 aa15.06■□□□□ 0
SF1-202ENST00000334944 TGFB1I1O43294 461 aa15.06■□□□□ 0
SF1-202ENST00000334944 EYA4O95677 639 aa15.06■□□□□ 0
SF1-202ENST00000334944 GNA14O95837 355 aa15.06■□□□□ 0
SF1-202ENST00000334944 FAM107AO95990 144 aa15.06■□□□□ 0
SF1-202ENST00000334944 AFPP02771 609 aaKnown RBP15.06■□□□□ 0
SF1-202ENST00000334944 EPHB4P54760 987 aa15.06■□□□□ 0
SF1-202ENST00000334944 EPM2AIP1Q7L775 607 aaPredicted RBP15.06■□□□□ 0
SF1-202ENST00000334944 FAM167BQ9BTA0 163 aa15.06■□□□□ 0
SF1-202ENST00000334944 NOD2Q9HC29 1040 aa15.06■□□□□ 0
SF1-202ENST00000334944 GCNT4Q9P109 453 aa15.06■□□□□ 0
SF1-202ENST00000334944 GLI1P08151 1106 aa15.06■□□□□ 0
SF1-202ENST00000334944 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
SF1-202ENST00000334944 KDM7AQ6ZMT4 941 aa15.06■□□□□ 0
SF1-202ENST00000334944 YTHDF3Q7Z739 585 aaKnown RBP15.06■□□□□ 0
SF1-202ENST00000334944 ZNF341Q9BYN7 854 aa15.06■□□□□ 0
SF1-202ENST00000334944 ETAA1Q9NY74 926 aa15.06■□□□□ 0
SF1-202ENST00000334944 COL20A1Q9P218 1284 aa15.06■□□□□ 0
SF1-202ENST00000334944 HERC5Q9UII4 1024 aaKnown RBP15.06■□□□□ 0
SF1-202ENST00000334944 FZD1Q9UP38 647 aa15.06■□□□□ 0
SF1-202ENST00000334944 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
SF1-202ENST00000334944 PHF20L1A8MW92 1017 aa15.06■□□□□ 0
SF1-202ENST00000334944 LRRN2O75325 713 aa15.06■□□□□ 0
SF1-202ENST00000334944 PSMD10O75832 226 aa15.06■□□□□ 0
SF1-202ENST00000334944 DPEP1P16444 411 aa15.06■□□□□ 0
SF1-202ENST00000334944 CEP55Q53EZ4 464 aa15.06■□□□□ 0
SF1-202ENST00000334944 SPATS2Q86XZ4 545 aaKnown RBP15.06■□□□□ 0
SF1-202ENST00000334944 HYOU1Q9Y4L1 999 aa15.06■□□□□ 0
SF1-202ENST00000334944 COL4A5P29400 1685 aa15.05■□□□□ 0
SF1-202ENST00000334944 SSU72P8A0A1W2PR75 194 aa15.05■□□□□ 0
SF1-202ENST00000334944 GUCY2DQ02846 1103 aa15.05■□□□□ 0
SF1-202ENST00000334944 ADCY2Q08462 1091 aa15.05■□□□□ 0
SF1-202ENST00000334944 SLC18A3Q16572 532 aa15.05■□□□□ 0
SF1-202ENST00000334944 TTLL6Q8N841 843 aa15.05■□□□□ 0
SF1-202ENST00000334944 CCDC26Q8TAB7 109 aa15.05■□□□□ 0
SF1-202ENST00000334944 FAM151AQ8WW52 585 aa15.05■□□□□ 0
SF1-202ENST00000334944 SLC35C1Q96A29 364 aa15.05■□□□□ 0
SF1-202ENST00000334944 WDR11Q9BZH6 1224 aa15.05■□□□□ 0
SF1-202ENST00000334944 EPB41L5Q9HCM4 733 aa15.05■□□□□ 0
SF1-202ENST00000334944 STIM2Q9P246 746 aa15.05■□□□□ 0
SF1-202ENST00000334944 PPP1R1BQ9UD71 204 aaPredicted RBP15.05■□□□□ 0
SF1-202ENST00000334944 TRAF3IP3Q9Y228 551 aa15.05■□□□□ 0
SF1-202ENST00000334944 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
SF1-202ENST00000334944 GFPT2O94808 682 aa15.05■□□□□ -0
SF1-202ENST00000334944 RXRBP28702 533 aa15.05■□□□□ -0
SF1-202ENST00000334944 ODR4Q5SWX8 454 aa15.05■□□□□ -0
SF1-202ENST00000334944 IQCDQ96DY2 449 aa15.05■□□□□ -0
SF1-202ENST00000334944 BORCS6Q96GS4 357 aa15.05■□□□□ -0
SF1-202ENST00000334944 CCPG1Q9ULG6 757 aa15.05■□□□□ -0
SF1-202ENST00000334944 ATXN2Q99700 1313 aaKnown RBP15.05■□□□□ -0
SF1-202ENST00000334944 IPO5O00410 1097 aaKnown RBP15.04■□□□□ -0
SF1-202ENST00000334944 CALUO43852 315 aaPredicted RBP15.04■□□□□ -0
SF1-202ENST00000334944 EPB41P11171 864 aaKnown RBP15.04■□□□□ -0
SF1-202ENST00000334944 ITGB5P18084 799 aa15.04■□□□□ -0
SF1-202ENST00000334944 ALS2CLQ60I27 953 aa15.04■□□□□ -0
SF1-202ENST00000334944 C8orf74Q6P047 294 aa15.04■□□□□ -0
SF1-202ENST00000334944 C1orf186Q6ZWK4 172 aa15.04■□□□□ -0
SF1-202ENST00000334944 BZW1Q7L1Q6 419 aaKnown RBP15.04■□□□□ -0
SF1-202ENST00000334944 IRF2BP2Q7Z5L9 587 aa15.04■□□□□ -0
SF1-202ENST00000334944 SAAL1Q96ER3 474 aa15.04■□□□□ -0
SF1-202ENST00000334944 SH3GL3Q99963 347 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms