RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 BAG4O95429 457 aaKnown RBP7.17□□□□□ -1.26
USP16-201ENST00000334352 HOXA9P31269 272 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 PLXNA3P51805 1871 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 NLRP5P59047 1200 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 CLLU1OSQ5K130 101 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 UBXN11Q5T124 520 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 JAKMIP3Q5VZ66 844 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 C15orf39Q6ZRI6 1047 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 PLCD3Q8N3E9 789 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 POF1BQ8WVV4 589 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 ZSCAN31Q96LW9 406 aaPredicted RBP7.17□□□□□ -1.26
USP16-201ENST00000334352 OXCT2Q9BYC2 517 aaPredicted RBP7.17□□□□□ -1.26
USP16-201ENST00000334352 BCL11AQ9H165 835 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 ZSWIM4Q9H7M6 989 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 IFT122Q9HBG6 1241 aa7.17□□□□□ -1.26
USP16-201ENST00000334352 ALG13Q9NP73 1137 aaKnown RBP7.17□□□□□ -1.26
USP16-201ENST00000334352 DDX25Q9UHL0 483 aaKnown RBP7.17□□□□□ -1.26
USP16-201ENST00000334352 PUF60Q9UHX1 559 aaKnown RBP7.17□□□□□ -1.26
USP16-201ENST00000334352 CLASP2O75122 1294 aaKnown RBP7.16□□□□□ -1.26
USP16-201ENST00000334352 OFD1O75665 1012 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 CTDNEP1O95476 244 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 BRD1O95696 1058 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 CTSHP09668 335 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 ZSCAN20P17040 1043 aaPredicted RBP7.16□□□□□ -1.26
USP16-201ENST00000334352 PTENP60484 403 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 KRT17Q04695 432 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 XKR4Q5GH76 650 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 HYIQ5T013 277 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 CMTR1Q8N1G2 835 aaKnown RBP7.16□□□□□ -1.26
USP16-201ENST00000334352 FAM122AQ96E09 287 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 SLC26A6Q9BXS9 759 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 FOXP1Q9H334 677 aaPredicted RBP7.16□□□□□ -1.26
USP16-201ENST00000334352 CDHR5Q9HBB8 845 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP16-201ENST00000334352 TDRD15B5MCY1 1934 aaKnown RBP7.16□□□□□ -1.26
USP16-201ENST00000334352 EVPLQ92817 2033 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 DENND3A2RUS2 1198 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 C2orf71A6NGG8 1288 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 PRPHP41219 470 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 FXR2P51116 673 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP16-201ENST00000334352 TFF2Q03403 129 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 SIGLEC14Q08ET2 396 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 SCRN1Q12765 414 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 TFDP1Q14186 410 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 PDIA5Q14554 519 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 PRR16Q569H4 304 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 KCNT2Q6UVM3 1135 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 RSPO2Q6UXX9 243 aaPredicted RBP7.16□□□□□ -1.26
USP16-201ENST00000334352 ANO5Q75V66 913 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 LRRC2Q9BYS8 371 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 EPS15L1Q9UBC2 864 aa7.16□□□□□ -1.26
USP16-201ENST00000334352 BACH1O14867 736 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 ADAMTS3O15072 1205 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 DGAT1O75907 488 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 RXRAP19793 462 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 ABCD1P33897 745 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 KRT2P35908 639 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 MLLT6P55198 1093 aaPredicted RBP7.15□□□□□ -1.26
USP16-201ENST00000334352 TBC1D8BQ0IIM8 1120 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 CCDC85BQ15834 202 aaPredicted RBP7.15□□□□□ -1.26
USP16-201ENST00000334352 AMHR2Q16671 573 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 UGCGQ16739 394 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 PTPN21Q16825 1174 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 SPRED2Q7Z698 418 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 C2orf40Q9H1Z8 148 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 EPHX3Q9H6B9 360 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 BRMS1Q9HCU9 246 aa7.15□□□□□ -1.26
USP16-201ENST00000334352 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.26
USP16-201ENST00000334352 FDPSP14324 419 aaKnown RBP7.15□□□□□ -1.27
USP16-201ENST00000334352 IL9P15248 144 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 MAGEA9P43362 315 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 PTPN5P54829 565 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 ASIC4Q96FT7 647 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 IGSF21Q96ID5 467 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 RIPOR3Q96MK2 946 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 UROC1Q96N76 676 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 C17orf75Q9HAS0 396 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 CHST7Q9NS84 486 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 TRANK1O15050 2925 aa7.15□□□□□ -1.27
USP16-201ENST00000334352 ADRB2P07550 413 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 MARK3P27448 753 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 WEE1P30291 646 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 HOXA11P31270 313 aaPredicted RBP7.14□□□□□ -1.27
USP16-201ENST00000334352 NOMO2Q5JPE7 1267 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 URGCPQ8TCY9 931 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 IER2Q9BTL4 223 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 FZD8Q9H461 694 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 CD320Q9NPF0 282 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 FAM105AQ9NUU6 356 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 TYW1Q9NV66 732 aaKnown RBP7.14□□□□□ -1.27
USP16-201ENST00000334352 KCND2Q9NZV8 630 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 SUCLA2Q9P2R7 463 aaPredicted RBP7.14□□□□□ -1.27
USP16-201ENST00000334352 COL4A3BPQ9Y5P4 624 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 CHD9Q3L8U1 2897 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 PATJQ8NI35 1801 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 TBKBP1A7MCY6 615 aa7.14□□□□□ -1.27
USP16-201ENST00000334352 IRS1P35568 1242 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms