RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 FAM84AQ96KN4 292 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 RIT2Q99578 217 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 AGO4Q9HCK5 861 aaKnown RBP20.59■□□□□ 0.89
RFTN1-201ENST00000334133 DMAC2Q9NW81 257 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 PEX3P56589 373 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 SLC20A1Q8WUM9 679 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 KAT5Q92993 513 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 DDX47Q9H0S4 455 aaKnown RBP20.58■□□□□ 0.89
RFTN1-201ENST00000334133 TELO2Q9Y4R8 837 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 RBBP6Q7Z6E9 1792 aaKnown RBP20.58■□□□□ 0.89
RFTN1-201ENST00000334133 PCNTO95613 3336 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 P4HBP07237 508 aaKnown RBP20.58■□□□□ 0.89
RFTN1-201ENST00000334133 ITGA4P13612 1032 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 FERP16591 822 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 GUCY2CP25092 1073 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 PPP3CAQ08209 521 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 ZNF746Q6NUN9 644 aaPredicted RBP20.58■□□□□ 0.89
RFTN1-201ENST00000334133 STXBP4Q6ZWJ1 553 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 OLIG1Q8TAK6 271 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 UBE2TQ9NPD8 197 aaPredicted RBP20.58■□□□□ 0.89
RFTN1-201ENST00000334133 SEL1LQ9UBV2 794 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 RIPK3Q9Y572 518 aa20.58■□□□□ 0.89
RFTN1-201ENST00000334133 BACH1O14867 736 aa20.58■□□□□ 0.88
RFTN1-201ENST00000334133 ACTN2P35609 894 aa20.58■□□□□ 0.88
RFTN1-201ENST00000334133 EPHB4P54760 987 aa20.58■□□□□ 0.88
RFTN1-201ENST00000334133 KCTD16Q68DU8 428 aa20.58■□□□□ 0.88
RFTN1-201ENST00000334133 ARL8AQ96BM9 186 aa20.58■□□□□ 0.88
RFTN1-201ENST00000334133 CTDP1Q9Y5B0 961 aaPredicted RBP20.58■□□□□ 0.88
RFTN1-201ENST00000334133 KRT14P02533 472 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 YWHABP31946 246 aaKnown RBP20.57■□□□□ 0.88
RFTN1-201ENST00000334133 CIAPIN1Q6FI81 312 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 ARHGEF19Q8IW93 802 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 ARHGEF26Q96DR7 871 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 STK33Q9BYT3 514 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 CALCOCO1Q9P1Z2 691 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 LARSQ9P2J5 1176 aaKnown RBP20.57■□□□□ 0.88
RFTN1-201ENST00000334133 APEX2Q9UBZ4 518 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 QARSP47897 775 aaKnown RBP20.57■□□□□ 0.88
RFTN1-201ENST00000334133 FAM102BQ5T8I3 360 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 IFT20Q8IY31 132 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 AGBL3Q8NEM8 1001 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 SLC35G2Q8TBE7 412 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 RMDN3Q96TC7 470 aa20.57■□□□□ 0.88
RFTN1-201ENST00000334133 TNS1Q9HBL0 1735 aaKnown RBP20.56■□□□□ 0.88
RFTN1-201ENST00000334133 GTPBP10A4D1E9 387 aaKnown RBP20.56■□□□□ 0.88
RFTN1-201ENST00000334133 GOLGA6CA6NDK9 693 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 BUB1BO60566 1050 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-201ENST00000334133 PPP1R37O75864 691 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 GOLGA6DP0CG33 693 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 COPB2P35606 906 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 PRPF4BQ13523 1007 aaKnown RBP20.56■□□□□ 0.88
RFTN1-201ENST00000334133 HLTFQ14527 1009 aaKnown RBP eCLIP20.56■□□□□ 0.88
RFTN1-201ENST00000334133 TNIP1Q15025 636 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 LEKR1Q6ZMV7 388 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 PLEKHO2Q8TD55 490 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 CCDC127Q96BQ5 260 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 GOLGA6AQ9NYA3 693 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 PSD3Q9NYI0 1048 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 TCEAL9Q9UHQ7 104 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 VCAM1P19320 739 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 C10orf76Q5T2E6 689 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 POTEAQ6S8J7 498 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 SH2D3CQ8N5H7 860 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 SAAL1Q96ER3 474 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 TEPSINQ96N21 525 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 MKNK1Q9BUB5 465 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 THAP2Q9H0W7 228 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-201ENST00000334133 PPP1R9AQ9ULJ8 1098 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 GJA3Q9Y6H8 435 aa20.56■□□□□ 0.88
RFTN1-201ENST00000334133 CCDC169A6NNP5 214 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 PLA2G6O60733 806 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 CCNE2O96020 404 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 KRT13P13646 458 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 XKR9Q5GH70 373 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 NBPF12Q5TAG4 269 aaPredicted RBP20.55■□□□□ 0.88
RFTN1-201ENST00000334133 HAUS6Q7Z4H7 955 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 ZKSCAN4Q969J2 545 aaPredicted RBP20.55■□□□□ 0.88
RFTN1-201ENST00000334133 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 POP1Q99575 1024 aaKnown RBP20.55■□□□□ 0.88
RFTN1-201ENST00000334133 NOC2LQ9Y3T9 749 aaKnown RBP20.55■□□□□ 0.88
RFTN1-201ENST00000334133 TNFAIP3P21580 790 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 PGM5Q15124 567 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 FKBP1CQ5VVH2 108 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 TAF3Q5VWG9 929 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 ZIM3Q96PE6 472 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 SLC38A10Q9HBR0 1119 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 RNF14Q9UBS8 474 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 FBXL5Q9UKA1 691 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 NENFQ9UMX5 172 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 UBIAD1Q9Y5Z9 338 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 SLC30A5Q8TAD4 765 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 JDP2Q8WYK2 163 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 STRA6Q9BX79 667 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 GDF3Q9NR23 364 aa20.55■□□□□ 0.88
RFTN1-201ENST00000334133 RPTORQ8N122 1335 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 WDR46O15213 610 aaKnown RBP20.54■□□□□ 0.88
RFTN1-201ENST00000334133 VAMP7P51809 220 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 ZNF211Q13398 564 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms