RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 FNTAP49354 379 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MAGOHP61326 146 aaKnown RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 ABCB5Q2M3G0 1257 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MOXD1Q6UVY6 613 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 GLT8D2Q9H1C3 349 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 UTRNP46939 3433 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 H0YHG0 523 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 GH2P01242 217 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 FERP16591 822 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 KRT71Q3SY84 523 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 TMEM179Q6ZVK1 233 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 SLC20A1Q8WUM9 679 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 ALG3Q92685 438 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 FAM20AQ96MK3 541 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 TBX3O15119 743 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 SHBGP04278 402 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 ECE1P42892 770 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 MARCKSL1P49006 195 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 LLGL1Q15334 1064 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 LRIG3Q6UXM1 1119 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 C1orf186Q6ZWK4 172 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 CPNE8Q86YQ8 564 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 FIZ1Q96SL8 496 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 HSD17B14Q9BPX1 270 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 SMIM23A6NLE4 172 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 TMEM110-MUSTN1A8MSY1 372 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 CCDC188H7C350 402 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 FAM107AO95990 144 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 DLG4P78352 724 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 PHLDB3Q6NSJ2 640 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-201ENST00000333371 OTOP1Q7RTM1 612 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 ZSWIM2Q8NEG5 633 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 LMBR1Q8WVP7 490 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 SH2D3AQ9BRG2 576 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 PKD2L1Q9P0L9 805 aa13.36□□□□□ -0.27
VPS33B-201ENST00000333371 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 FOXN3O00409 490 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 SF3B2Q13435 895 aaKnown RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 CCDC174Q6PII3 467 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 CSRNP1Q96S65 589 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 ACP6Q9NPH0 428 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 OLFML3Q9NRN5 406 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 A6NNZ2 444 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 ATP2C2O75185 946 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 ENTPD3O75355 529 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 BMP3P12645 472 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 GUCY2CP25092 1073 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 PPATQ06203 517 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 TUBB8Q3ZCM7 444 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 TATDN1Q6P1N9 297 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 SYCE1Q8N0S2 351 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 TTLL6Q8N841 843 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 CCDC26Q8TAB7 109 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 CTNNBL1Q8WYA6 563 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 RAPGEF5Q92565 580 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 KRT35Q92764 455 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 ELMO3Q96BJ8 720 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 STK33Q9BYT3 514 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 PARVGQ9HBI0 331 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 DDX20Q9UHI6 824 aaKnown RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
VPS33B-201ENST00000333371 UTP11Q9Y3A2 253 aaKnown RBP13.35□□□□□ -0.27
VPS33B-201ENST00000333371 RBBP6Q7Z6E9 1792 aaKnown RBP13.34□□□□□ -0.27
VPS33B-201ENST00000333371 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-201ENST00000333371 CAND2O75155 1236 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms