RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 EYA4O95677 639 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 CYP11B2P19099 503 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 ARL2P36404 184 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 PHKA2P46019 1235 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 SARSP49591 514 aaKnown RBP15.56■□□□□ 0.08
LIMS1-201ENST00000332345 CEBPZQ03701 1054 aaKnown RBP15.56■□□□□ 0.08
LIMS1-201ENST00000332345 PTPAQ15257 358 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 HYIQ5T013 277 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 MAEAQ7L5Y9 396 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 CABP7Q86V35 215 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 NPAS4Q8IUM7 802 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 CALML4Q96GE6 196 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 DACT1Q9NYF0 836 aa15.56■□□□□ 0.08
LIMS1-201ENST00000332345 SRPRBQ9Y5M8 271 aaKnown RBP15.56■□□□□ 0.08
LIMS1-201ENST00000332345 E9PMD0 336 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 MGEA5O60502 916 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 FGFR4P22455 802 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 FAM189BP81408 668 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 NCBP1Q09161 790 aaKnown RBP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 DSC3Q14574 896 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 GRIN2CQ14957 1233 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 SLC39A14Q15043 492 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 PCBP1Q15365 356 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 FAM102BQ5T8I3 360 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 FOXD4L5Q5VV16 416 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 CATSPER4Q7RTX7 472 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 LINC01599Q8WXQ3 324 aa15.55■□□□□ 0.08
LIMS1-201ENST00000332345 FOXD4L4Q8WXT5 416 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 CDX2Q99626 313 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 POLR3FQ9H1D9 316 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 MORC2Q9Y6X9 1032 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-201ENST00000332345 LCHNA4D1U4 455 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 C9IYK1 514 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 DGKIO75912 1065 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 F13A1P00488 732 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 MARCKSP29966 332 aaPredicted RBP15.54■□□□□ 0.08
LIMS1-201ENST00000332345 PTENP60484 403 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 TAP1Q03518 808 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 ATL3Q6DD88 541 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 CRIPAKQ8N1N5 446 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 GUCD1Q96NT3 240 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
LIMS1-201ENST00000332345 ELAC1Q9H777 363 aaKnown RBP15.54■□□□□ 0.08
LIMS1-201ENST00000332345 TFIP11Q9UBB9 837 aaKnown RBP15.54■□□□□ 0.08
LIMS1-201ENST00000332345 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 LINC01553A4QN01 128 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 SLC34A2O95436 690 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 SKIP12755 728 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 GLRA2P23416 452 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 NASPP49321 788 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-201ENST00000332345 GRB10Q13322 594 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 STK38Q15208 465 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-201ENST00000332345 FIBCD1Q8N539 461 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-201ENST00000332345 ASAP3Q8TDY4 903 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 KIFAP3Q92845 792 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 IFT74Q96LB3 600 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 PNMA5Q96PV4 448 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 TGS1Q96RS0 853 aaKnown RBP15.53■□□□□ 0.08
LIMS1-201ENST00000332345 GAS2L1Q99501 681 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-201ENST00000332345 PLIN2Q99541 437 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 GPRC5CQ9NQ84 441 aa15.53■□□□□ 0.08
LIMS1-201ENST00000332345 A0A0U1RQF3 1178 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 INO80B-WBP1J3KQ70 363 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 ERLIN2O94905 339 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 EOMESO95936 686 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 SSBP05455 408 aaKnown RBP eCLIP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 IBSPP21815 317 aaPredicted RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 AXLP30530 894 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 TXLNAP40222 546 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 GRIN1Q05586 938 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 CAPSQ13938 189 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 PPP2R5AQ15172 486 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 TMEM119Q4V9L6 283 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 TWF2Q6IBS0 349 aaKnown RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 RINT1Q6NUQ1 792 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 SYT2Q8N9I0 419 aaPredicted RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 KRI1Q8N9T8 703 aaKnown RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 LINC00301Q8NCQ3 95 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 ARNTL2Q8WYA1 636 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 ZNF689Q96CS4 500 aaPredicted RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 SAMD11Q96NU1 681 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 TIPINQ9BVW5 301 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 TRAIPQ9BWF2 469 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 CCSER1Q9C0I3 900 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 PRDM12Q9H4Q4 367 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 MINDY3Q9H8M7 445 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 TMEM161AQ9NX61 479 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 CCDC39Q9UFE4 941 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 KCNG1Q9UIX4 513 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 FBXO2Q9UK22 296 aaPredicted RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 CFAP45Q9UL16 551 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
LIMS1-201ENST00000332345 STXBP5LQ9Y2K9 1186 aa15.52■□□□□ 0.08
LIMS1-201ENST00000332345 LRRIQ4A6NIV6 560 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms