RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SPIRE1Q08AE8 756 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 XKR3Q5GH77 459 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 GJB7Q6PEY0 223 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 ZBTB45Q96K62 511 aaPredicted RBP17.32■□□□□ 0.36
PDGFB-201ENST00000331163 INPP4AQ96PE3 977 aaPredicted RBP17.32■□□□□ 0.36
PDGFB-201ENST00000331163 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
PDGFB-201ENST00000331163 FEZ2Q9UHY8 353 aaPredicted RBP17.32■□□□□ 0.36
PDGFB-201ENST00000331163 H2AFXP16104 143 aaPredicted RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 HOXA7P31268 230 aaPredicted RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 ORC2Q13416 577 aaPredicted RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 MOXD1Q6UVY6 613 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 GUF1Q8N442 669 aaKnown RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 ACRBPQ8NEB7 543 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 SPC25Q9HBM1 224 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 CASQ1P31415 396 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDGFB-201ENST00000331163 CETN1Q12798 172 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 KCNH2Q12809 1159 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 SH3D19Q5HYK7 790 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 HINFPQ9BQA5 517 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 TINF2Q9BSI4 451 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 LCMT1Q9UIC8 334 aa17.31■□□□□ 0.36
PDGFB-201ENST00000331163 OATP04181 439 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 NPTX2P47972 431 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 KCNB1Q14721 858 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 VPS18Q9P253 973 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 SUCLA2Q9P2R7 463 aaPredicted RBP17.3■□□□□ 0.36
PDGFB-201ENST00000331163 TTC26A0AVF1 554 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 ERLIN2O94905 339 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 INSRRP14616 1297 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 ACVR2BQ13705 512 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 CXCL17Q6UXB2 119 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 SCARA5Q6ZMJ2 495 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 TTC16Q8NEE8 873 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 DNERQ8NFT8 737 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
PDGFB-201ENST00000331163 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 PLEKHA4Q9H4M7 779 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 ARFGAP3Q9NP61 516 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 KCNA2P16389 499 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 KLRC1P26715 233 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 PPFIA1Q13136 1202 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 TTI2Q6NXR4 508 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 ZSWIM2Q8NEG5 633 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 REPS2Q8NFH8 660 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 NPLOC4Q8TAT6 608 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 RNPEPQ9H4A4 650 aa17.3■□□□□ 0.36
PDGFB-201ENST00000331163 H3BRB1 525 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 ITGBL1O95965 494 aaPredicted RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 GH1P01241 217 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 SREBF2Q12772 1141 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 EXOC3L4Q17RC7 722 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 ZNF746Q6NUN9 644 aaPredicted RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 METTL7BQ6UX53 244 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 ZBTB8OSQ8IWT0 167 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 IWS1Q96ST2 819 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 DUSP9Q99956 384 aaKnown RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 PI4K2AQ9BTU6 479 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 TUT1Q9H6E5 874 aaKnown RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 GCNT4Q9P109 453 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 GAP43P17677 238 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 SLC9A1P19634 815 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 ABCB4P21439 1286 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 NLRP11P59045 1033 aaKnown RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 PLCB4Q15147 1175 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 TOPORSQ9NS56 1045 aaPredicted RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 SSC5DA1L4H1 1573 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 SASH3O75995 380 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 MYL1P05976 194 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 TMOD1P28289 359 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 RASSF4Q9H2L5 321 aa17.29■□□□□ 0.36
PDGFB-201ENST00000331163 NXF1Q9UBU9 619 aaKnown RBP17.29■□□□□ 0.36
PDGFB-201ENST00000331163 TMEM110-MUSTN1A8MSY1 372 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 AKAP3O75969 853 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
PDGFB-201ENST00000331163 VWA3BQ502W6 1294 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 RASAL3Q86YV0 1011 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 CHP1Q99653 195 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 FAM237AA0A1B0GTK4 181 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 CD58P19256 250 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 C1orf186Q6ZWK4 172 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms