RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 AOC3Q16853 763 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 KRT79Q5XKE5 535 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 USP17L1Q7RTZ2 530 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 TBC1D7Q9P0N9 293 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 DAAM1Q9Y4D1 1078 aa19.58■□□□□ 0.73
CLSTN3-202ENST00000331148 CDK5RAP2Q96SN8 1893 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 ATAD5Q96QE3 1844 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 RPTORQ8N122 1335 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 GOLGA6L10A0A0M3HER8 536 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 SLC37A4O43826 429 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 ZBTB7AO95365 584 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 KCNA3P22001 575 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 PRKCIP41743 596 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 NPEPPSP55786 919 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 COPS2P61201 443 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 FKBP1AP62942 108 aaKnown RBP19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 ADCY2Q08462 1091 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 MKRN4PQ13434 485 aaPredicted RBP19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 SLC29A2Q14542 456 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 CNGA2Q16280 664 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 C6orf118Q5T5N4 469 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 ZDHHC24Q6UX98 284 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 KIF2BQ8N4N8 673 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 RBM46Q8TBY0 533 aaKnown RBP19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 KLHL29Q96CT2 875 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 LZTS2Q9BRK4 669 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 BIN2Q9UBW5 565 aaPredicted RBP19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 SAP30BPQ9UHR5 308 aaKnown RBP19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 AMFRQ9UKV5 643 aa19.58■□□□□ 0.72
CLSTN3-202ENST00000331148 NAV1Q8NEY1 1877 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 SLC9A1P19634 815 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 ANXA13P27216 316 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 PLTPP55058 493 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 BNIP1Q12981 228 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 SEPT2Q15019 361 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 HHIPL2Q6UWX4 724 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 SPZ1Q9BXG8 430 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 RAB34Q9BZG1 259 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 TMEM260Q9NX78 707 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
CLSTN3-202ENST00000331148 KLHL33A6NCF5 533 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 FAM187AA6NFU0 413 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ENO4A6NNW6 628 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 KLRF2D3W0D1 207 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 COPB2P35606 906 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 SCNN1DP51172 638 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ANKRD20A2Q5SQ80 823 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 UBAP2Q5T6F2 1119 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 SOGA3Q5TF21 947 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ANKRD20A1Q5TYW2 823 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 DCAF12L1Q5VU92 463 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ANKRD20A3Q5VUR7 823 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 AP1ARQ63HQ0 302 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ZC3H3Q8IXZ2 948 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 RTKN2Q8IZC4 609 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 REXO1Q8N1G1 1221 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 GBP7Q8N8V2 638 aaPredicted RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 EPS8L3Q8TE67 593 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 DYNLL2Q96FJ2 89 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 MKNK2Q9HBH9 465 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ARHGEF3Q9NR81 526 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 LUC7L3O95232 432 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ATP2A2P16615 1042 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ECM1Q16610 540 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 CROCCP2Q86T23 111 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 RNF217Q8TC41 542 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 FBXO25Q8TCJ0 367 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 GLG1Q92896 1179 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 TEKT1Q969V4 418 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 MOV10L1Q9BXT6 1211 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 KCTD10Q9H3F6 313 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ERVK-5Q9HDB9 667 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 ADAM22Q9P0K1 906 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 CNOT7Q9UIV1 285 aaKnown RBP19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 HDAC9Q9UKV0 1011 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 INTUQ9ULD6 942 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 SNX24Q9Y343 169 aa19.56■□□□□ 0.72
CLSTN3-202ENST00000331148 KIAA0391O15091 583 aaKnown RBP19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 DDX3YO15523 660 aaKnown RBP19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 TDP2O95551 362 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 ABL2P42684 1182 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 MSH2P43246 934 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 CCNG1P51959 295 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 ADAM9Q13443 819 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 PDIA5Q14554 519 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 PPP2R5EQ16537 467 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 KIAA1755Q5JYT7 1200 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 DACT2Q5SW24 774 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 JAMLQ86YT9 394 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 PARD3BQ8TEW8 1205 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 TMEM47Q9BQJ4 181 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 TMEM109Q9BVC6 243 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 STMN4Q9H169 189 aaPredicted RBP19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 ATF5Q9Y2D1 282 aaPredicted RBP19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 STK38LQ9Y2H1 464 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 PCDHA2Q9Y5H9 948 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 SUN1O94901 812 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 SLCO1A2P46721 670 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 PRPF4BQ13523 1007 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms