RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CYP3A4P08684 503 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 KRT13P13646 458 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 GCLMP48507 274 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 DLG4P78352 724 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 CHURC1Q8WUH1 139 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 LRRC45Q96CN5 670 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 E7EVH7 732 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 MMP14P50281 582 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 FKBP1AP62942 108 aaKnown RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 DHX9Q08211 1270 aaKnown RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 AADACL2Q6P093 401 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 PACS2Q86VP3 889 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 SLC20A1Q8WUM9 679 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 BORCS6Q96GS4 357 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 STK32BQ9NY57 414 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 UTP11Q9Y3A2 253 aaKnown RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 EIF3DO15371 548 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 HSPA9P38646 679 aaKnown RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 SKOR1P84550 965 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 IFFO1Q0D2I5 559 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 CUL1Q13616 776 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 RFFLQ8WZ73 363 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 GLG1Q92896 1179 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 TEKT3Q9BXF9 490 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 GLIS2Q9BZE0 524 aaPredicted RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 TMEM150BA6NC51 233 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 GOLGA8IPA6NC78 632 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 SMIM23A6NLE4 172 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 GOLGA8JA6NMD2 632 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 RNF187Q5TA31 235 aaPredicted RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 PHLDB3Q6NSJ2 640 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 BTNL9Q6UXG8 535 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 APEX2Q9UBZ4 518 aa15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
ATP2C1-201ENST00000328560 EMSYQ7Z589 1322 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 KIAA0754O94854 1291 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 SF3A3Q12874 501 aaKnown RBP eCLIP15.22■□□□□ 0.035e-6■■□□□ 14.3
ATP2C1-201ENST00000328560 UAP1Q16222 522 aaPredicted RBP15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 PADI6Q6TGC4 694 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 MIER3Q7Z3K6 550 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 MRPL11Q9Y3B7 192 aaKnown RBP15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 SRCAPQ6ZRS2 3230 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 CCDC188H7C350 402 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 ECHS1P30084 290 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 KRT71Q3SY84 523 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 TADA2BQ86TJ2 420 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 EFCAB13Q8IY85 973 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 MREGQ8N565 214 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 SLC5A5Q92911 643 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 AGBL1Q96MI9 1066 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 ACP6Q9NPH0 428 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 GTPBP10A4D1E9 387 aaKnown RBP15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 TMOD1P28289 359 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 BFSP1Q12934 665 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 UHMK1Q8TAS1 419 aaKnown RBP15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 TCEAL9Q9UHQ7 104 aa15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 NOVA2Q9UNW9 492 aaKnown RBP15.22■□□□□ 0.03
ATP2C1-201ENST00000328560 UBR3Q6ZT12 1888 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 HMGB1P1B2RPK0 211 aaPredicted RBP15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 PPP1R37O75864 691 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 INPP5BP32019 993 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 PPP2R5CQ13362 524 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 GRIPAP1Q4V328 841 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 ZSWIM2Q8NEG5 633 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 CALR3Q96L12 384 aaKnown RBP15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 FIZ1Q96SL8 496 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 A0A087WUV0 522 aaPredicted RBP15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 TLDC2A0PJX2 215 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 ERLIN2O94905 339 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 CCDC172P0C7W6 258 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 MDH1P40925 334 aaKnown RBP15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 MESDQ14696 234 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 KAT5Q92993 513 aa15.21■□□□□ 0.03
ATP2C1-201ENST00000328560 H0YHG0 523 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 CES2O00748 559 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 ATMINO43313 823 aaPredicted RBP15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 FTLP02792 175 aaPredicted RBP15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 ZNF844Q08AG5 666 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 CCDC127Q96BQ5 260 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 HES6Q96HZ4 224 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 TMBIM4Q9HC24 238 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
ATP2C1-201ENST00000328560 SNX24Q9Y343 169 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms