RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 KRTAP9-3Q9BYQ3 159 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PIF1Q9H611 641 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 KANSL2Q9H9L4 492 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ACSS2Q9NR19 701 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 INTS7Q9NVH2 962 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 Q9UFV3 132 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 TCAF1Q9Y4C2 921 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 SUPT6HQ7KZ85 1726 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 RASSF10A6NK89 507 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 MAFO75444 373 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 JMJD7P0C870 316 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ZBTB48P10074 688 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ZNF20P17024 532 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 SELENOPP49908 381 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 EIF4HQ15056 248 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 HS1BP3Q53T59 392 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 TMEM200BQ69YZ2 307 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 LRSAM1Q6UWE0 723 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 APPBP2Q92624 585 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 RNPC3Q96LT9 517 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 CDK5RAP1Q96SZ6 601 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 FOXB1Q99853 325 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 MSL2Q9HCI7 577 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ST6GALNAC2Q9UJ37 374 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 MYRFQ9Y2G1 1151 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 NR2E1Q9Y466 385 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PTPDC1A2A3K4 754 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 GOLGA6L22H0YM25 854 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 CYP17A1P05093 508 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 KRTAP10-2P60368 255 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 RBM6P78332 1123 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 CD83Q01151 205 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ALDH6A1Q02252 535 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ROM1Q03395 351 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 MOGSQ13724 837 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ICAM4Q14773 271 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ZXDCQ2QGD7 858 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 CFAP100Q494V2 611 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 C16orf86Q6ZW13 317 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 NME9Q86XW9 330 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 NEIL1Q96FI4 390 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PTPN18Q99952 460 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 SEMA4AQ9H3S1 761 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 DEF6Q9H4E7 631 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PTPN22Q9Y2R2 807 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 SMG6Q86US8 1419 aaKnown RBP2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 PATE3B3GLJ2 98 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 CBX4O00257 560 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 ARHGAP6O43182 974 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 SDSP20132 328 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 AGBL4Q5VU57 503 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 CDCA2Q69YH5 1023 aaPredicted RBP2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 KIAA1958Q8N8K9 716 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 DNERQ8NFT8 737 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 KRTAP3-1Q9BYR8 98 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 OR10A2Q9H208 303 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 FANCLQ9NW38 375 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 B4GALT6Q9UBX8 382 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 CDC42EP3Q9UKI2 254 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 OAZ3Q9UMX2 235 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 ZKSCAN5Q9Y2L8 839 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 MAGI2Q86UL8 1455 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 QSER1Q2KHR3 1735 aa2.34□□□□□ -2.03
CCDC144A-201ENST00000328495 UBA6A0AVT1 1052 aaPredicted RBP2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 C1QTNF3-AMACRE9PGA6 284 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF623O75123 536 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 CDC45O75419 566 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 INSRRP14616 1297 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 CR2P20023 1033 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 NFYCQ13952 458 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 PUM1Q14671 1186 aaKnown RBP eCLIP2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 PCOLCEQ15113 449 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 RNF151Q2KHN1 245 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 USP30Q70CQ3 517 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 RTN4RL1Q86UN2 441 aaPredicted RBP2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 GNRHR2Q96P88 292 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 KIAA1683Q9H0B3 1180 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 KLC2Q9H0B6 622 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 CD248Q9HCU0 757 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 PUF60Q9UHX1 559 aaKnown RBP2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 CD2APQ9Y5K6 639 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 ATP10BO94823 1461 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 ERVK-7P63135 1459 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 SCRIBQ14160 1630 aa2.34□□□□□ -2.04
CCDC144A-201ENST00000328495 TRAF5O00463 557 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 CDC14BO60729 498 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 PRLP01236 227 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 MRE11P49959 708 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 HSPA2P54652 639 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 SESN2P58004 480 aaPredicted RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 TTC38Q5R3I4 469 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 TRIM68Q6AZZ1 485 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 FILIP1Q7Z7B0 1213 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 FOXRED1Q96CU9 486 aaPredicted RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 C12orf65Q9H3J6 166 aaKnown RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 FAM184BQ9ULE4 1060 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 PLAAQ9Y263 795 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 TSC22D4Q9Y3Q8 395 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 RUSC2Q8N2Y8 1516 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms